Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.5■■□□□ 1.67
TRBV5-4A0A0C4DH59 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRBV5-4A0A0C4DH59 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
TRBV5-4A0A0C4DH59 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRBV5-4A0A0C4DH59 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TRBV5-4A0A0C4DH59 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.49■■□□□ 1.67
TRBV5-4A0A0C4DH59 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.49■■□□□ 1.67
TRBV5-4A0A0C4DH59 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRBV5-4A0A0C4DH59 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.48■■□□□ 1.67
TRBV5-4A0A0C4DH59 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
TRBV5-4A0A0C4DH59 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRBV5-4A0A0C4DH59 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.48■■□□□ 1.67
TRBV5-4A0A0C4DH59 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.47■■□□□ 1.67
TRBV5-4A0A0C4DH59 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TRBV5-4A0A0C4DH59 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.47■■□□□ 1.67
TRBV5-4A0A0C4DH59 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.47■■□□□ 1.67
TRBV5-4A0A0C4DH59 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.47■■□□□ 1.67
TRBV5-4A0A0C4DH59 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.47■■□□□ 1.67
TRBV5-4A0A0C4DH59 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.47■■□□□ 1.67
TRBV5-4A0A0C4DH59 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.46■■□□□ 1.67
TRBV5-4A0A0C4DH59 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
TRBV5-4A0A0C4DH59 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.46■■□□□ 1.67
TRBV5-4A0A0C4DH59 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.46■■□□□ 1.67
TRBV5-4A0A0C4DH59 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRBV5-4A0A0C4DH59 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
TRBV5-4A0A0C4DH59 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRBV5-4A0A0C4DH59 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRBV5-4A0A0C4DH59 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRBV5-4A0A0C4DH59 AC100797.4-201ENST00000631653 1827 ntBASIC25.44■■□□□ 1.66
TRBV5-4A0A0C4DH59 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.43■■□□□ 1.66
TRBV5-4A0A0C4DH59 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRBV5-4A0A0C4DH59 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRBV5-4A0A0C4DH59 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.42■■□□□ 1.66
TRBV5-4A0A0C4DH59 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.42■■□□□ 1.66
TRBV5-4A0A0C4DH59 DRD5P2-201ENST00000421395 2012 ntBASIC25.42■■□□□ 1.66
TRBV5-4A0A0C4DH59 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRBV5-4A0A0C4DH59 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.41■■□□□ 1.66
TRBV5-4A0A0C4DH59 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.41■■□□□ 1.66
TRBV5-4A0A0C4DH59 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TRBV5-4A0A0C4DH59 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRBV5-4A0A0C4DH59 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRBV5-4A0A0C4DH59 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRBV5-4A0A0C4DH59 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.4■■□□□ 1.66
TRBV5-4A0A0C4DH59 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRBV5-4A0A0C4DH59 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
TRBV5-4A0A0C4DH59 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRBV5-4A0A0C4DH59 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRBV5-4A0A0C4DH59 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRBV5-4A0A0C4DH59 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRBV5-4A0A0C4DH59 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.39■■□□□ 1.66
TRBV5-4A0A0C4DH59 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRBV5-4A0A0C4DH59 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.39■■□□□ 1.65
TRBV5-4A0A0C4DH59 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
TRBV5-4A0A0C4DH59 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TRBV5-4A0A0C4DH59 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRBV5-4A0A0C4DH59 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRBV5-4A0A0C4DH59 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRBV5-4A0A0C4DH59 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
TRBV5-4A0A0C4DH59 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRBV5-4A0A0C4DH59 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
TRBV5-4A0A0C4DH59 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRBV5-4A0A0C4DH59 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRBV5-4A0A0C4DH59 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.35■■□□□ 1.65
TRBV5-4A0A0C4DH59 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRBV5-4A0A0C4DH59 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.35■■□□□ 1.65
TRBV5-4A0A0C4DH59 ABHD17AP4-201ENST00000411545 909 ntBASIC25.34■■□□□ 1.65
TRBV5-4A0A0C4DH59 ZNRF2P2-203ENST00000454624 420 ntBASIC25.34■■□□□ 1.65
TRBV5-4A0A0C4DH59 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.34■■□□□ 1.65
TRBV5-4A0A0C4DH59 LINC01971-201ENST00000617888 1048 ntBASIC25.34■■□□□ 1.65
TRBV5-4A0A0C4DH59 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRBV5-4A0A0C4DH59 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.33■■□□□ 1.65
TRBV5-4A0A0C4DH59 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TRBV5-4A0A0C4DH59 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.32■■□□□ 1.64
TRBV5-4A0A0C4DH59 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRBV5-4A0A0C4DH59 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRBV5-4A0A0C4DH59 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
TRBV5-4A0A0C4DH59 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TRBV5-4A0A0C4DH59 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRBV5-4A0A0C4DH59 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TRBV5-4A0A0C4DH59 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TRBV5-4A0A0C4DH59 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRBV5-4A0A0C4DH59 AC142086.6-201ENST00000621154 1765 ntBASIC25.29■■□□□ 1.64
TRBV5-4A0A0C4DH59 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.29■■□□□ 1.64
TRBV5-4A0A0C4DH59 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRBV5-4A0A0C4DH59 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
TRBV5-4A0A0C4DH59 AP002414.2-202ENST00000590929 1450 ntBASIC25.28■■□□□ 1.64
TRBV5-4A0A0C4DH59 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRBV5-4A0A0C4DH59 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRBV5-4A0A0C4DH59 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.27■■□□□ 1.64
TRBV5-4A0A0C4DH59 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRBV5-4A0A0C4DH59 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRBV5-4A0A0C4DH59 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRBV5-4A0A0C4DH59 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms