Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 AC141586.3-201ENST00000562166 1838 ntBASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 MCRIP2P1-201ENST00000394346 511 ntBASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 YBX1P1-201ENST00000445822 960 ntBASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM56-RWDD3S4R434 AL049812.1-201ENST00000432563 2267 ntBASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 AC007322.4-201ENST00000509611 723 ntBASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 AL139246.5-201ENST00000606645 996 ntBASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 AC016405.3-201ENST00000607710 860 ntBASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM56-RWDD3S4R434 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 MFSD11-216ENST00000590393 1141 ntBASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 AC010536.3-201ENST00000620306 533 ntBASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 AC105020.6-201ENST00000621523 1217 ntBASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM56-RWDD3S4R434 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms