RNA–Protein interactions for RNA: ENST00000315781.9

SNAP47-201, Transcript of synaptosome associated protein 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNAP47, Length 2,367 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-201ENST00000315781 NISCHQ9Y2I1 1504 aa39.14■■■■□ 3.86
SNAP47-201ENST00000315781 CCDC180Q9P1Z9 1646 aa33.33■■■□□ 2.93
SNAP47-201ENST00000315781 SHROOM4Q9ULL8 1493 aa33.25■■■□□ 2.91
SNAP47-201ENST00000315781 ZCCHC6Q5VYS8 1495 aaKnown RBP33.09■■■□□ 2.89
SNAP47-201ENST00000315781 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
SNAP47-201ENST00000315781 DCAF8L2P0C7V8 631 aa32.47■■■□□ 2.79
SNAP47-201ENST00000315781 DCAF1Q9Y4B6 1507 aa32.13■■■□□ 2.73
SNAP47-201ENST00000315781 CHIC1Q5VXU3 224 aa31.61■■■□□ 2.65
SNAP47-201ENST00000315781 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
SNAP47-201ENST00000315781 SCRIBQ14160 1630 aa31.21■■■□□ 2.59
SNAP47-201ENST00000315781 ABCC9O60706 1549 aa31.19■■■□□ 2.58
SNAP47-201ENST00000315781 RSF1Q96T23 1441 aaPredicted RBP30.92■■■□□ 2.54
SNAP47-201ENST00000315781 NACADO15069 1562 aa30.86■■■□□ 2.53
SNAP47-201ENST00000315781 LOC105371045A0A1W2PR82 267 aa30.65■■■□□ 2.5
SNAP47-201ENST00000315781 RB1CC1Q8TDY2 1594 aa30.56■■■□□ 2.48
SNAP47-201ENST00000315781 CECR2Q9BXF3 1484 aa30.52■■■□□ 2.48
SNAP47-201ENST00000315781 PCGF6Q9BYE7 350 aa30.51■■■□□ 2.47
SNAP47-201ENST00000315781 HRCP23327 699 aa30.43■■■□□ 2.46
SNAP47-201ENST00000315781 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
SNAP47-201ENST00000315781 TRIM41Q8WV44 630 aa30.37■■■□□ 2.45
SNAP47-201ENST00000315781 WIZO95785 1651 aa30.23■■■□□ 2.43
SNAP47-201ENST00000315781 FAM9AQ8IZU1 332 aaPredicted RBP30.09■■■□□ 2.41
SNAP47-201ENST00000315781 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
SNAP47-201ENST00000315781 TRIM26Q12899 539 aaPredicted RBP29.98■■■□□ 2.39
SNAP47-201ENST00000315781 UNC13AQ9UPW8 1703 aa29.87■■■□□ 2.37
SNAP47-201ENST00000315781 SMARCA4P51532 1647 aa29.83■■■□□ 2.37
SNAP47-201ENST00000315781 EHMT2Q96KQ7 1210 aa29.82■■■□□ 2.36
SNAP47-201ENST00000315781 PPARGC1BQ86YN6 1023 aaKnown RBP29.79■■■□□ 2.36
SNAP47-201ENST00000315781 TOP2AP11388 1531 aaKnown RBP29.78■■■□□ 2.36
SNAP47-201ENST00000315781 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
SNAP47-201ENST00000315781 CCDC88BA6NC98 1476 aa29.65■■■□□ 2.34
SNAP47-201ENST00000315781 SMARCA2P51531 1590 aa29.6■■■□□ 2.33
SNAP47-201ENST00000315781 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
SNAP47-201ENST00000315781 BICRAQ9NZM4 1560 aa29.53■■■□□ 2.32
SNAP47-201ENST00000315781 ABCC8Q09428 1581 aa29.51■■■□□ 2.32
SNAP47-201ENST00000315781 ZEB1P37275 1124 aaPredicted RBP29.28■■■□□ 2.28
SNAP47-201ENST00000315781 PEG3Q9GZU2 1588 aa29.27■■■□□ 2.28
SNAP47-201ENST00000315781 SOGA1O94964 1423 aa29.23■■■□□ 2.27
SNAP47-201ENST00000315781 ATAD2BQ9ULI0 1458 aa29.1■■■□□ 2.25
SNAP47-201ENST00000315781 EEA1Q15075 1411 aa29.09■■■□□ 2.25
SNAP47-201ENST00000315781 RUSC2Q8N2Y8 1516 aa29.07■■■□□ 2.24
SNAP47-201ENST00000315781 CSRNP3Q8WYN3 585 aa29.07■■■□□ 2.24
SNAP47-201ENST00000315781 WRNQ14191 1432 aaPredicted RBP eCLIP29.06■■■□□ 2.24
SNAP47-201ENST00000315781 CEP162Q5TB80 1403 aa29.06■■■□□ 2.24
SNAP47-201ENST00000315781 BAZ1BQ9UIG0 1483 aaKnown RBP29.02■■■□□ 2.24
SNAP47-201ENST00000315781 TNIKQ9UKE5 1360 aa29.02■■■□□ 2.24
SNAP47-201ENST00000315781 UBTFP17480 764 aaKnown RBP28.95■■■□□ 2.23
SNAP47-201ENST00000315781 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
SNAP47-201ENST00000315781 GOLGA3Q08378 1498 aa28.88■■■□□ 2.21
SNAP47-201ENST00000315781 TTBK1Q5TCY1 1321 aaPredicted RBP28.84■■■□□ 2.21
SNAP47-201ENST00000315781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.79■■■□□ 2.2
SNAP47-201ENST00000315781 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
SNAP47-201ENST00000315781 CCER1Q8TC90 406 aaPredicted RBP28.73■■■□□ 2.19
SNAP47-201ENST00000315781 KIF21BO75037 1637 aa28.68■■■□□ 2.18
SNAP47-201ENST00000315781 TOP2BQ02880 1626 aa28.58■■■□□ 2.16
SNAP47-201ENST00000315781 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
SNAP47-201ENST00000315781 CLIP1P30622 1438 aa28.55■■■□□ 2.16
SNAP47-201ENST00000315781 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
SNAP47-201ENST00000315781 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
SNAP47-201ENST00000315781 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
SNAP47-201ENST00000315781 VPS8Q8N3P4 1428 aa28.4■■■□□ 2.14
SNAP47-201ENST00000315781 RANGAP1P46060 587 aaPredicted RBP28.38■■■□□ 2.13
SNAP47-201ENST00000315781 CUX1P39880 1505 aa28.32■■■□□ 2.12
SNAP47-201ENST00000315781 CFTRP13569 1480 aa28.3■■■□□ 2.12
SNAP47-201ENST00000315781 APLP2Q06481 763 aa28.29■■■□□ 2.12
SNAP47-201ENST00000315781 PRXQ9BXM0 1461 aa28.27■■■□□ 2.12
SNAP47-201ENST00000315781 ERICH3Q5RHP9 1530 aa28.25■■■□□ 2.11
SNAP47-201ENST00000315781 HNRNPUL2Q1KMD3 747 aaKnown RBP28.22■■■□□ 2.11
SNAP47-201ENST00000315781 KIF27Q86VH2 1401 aa28.19■■■□□ 2.1
SNAP47-201ENST00000315781 ARAP1Q96P48 1450 aa28.09■■■□□ 2.09
SNAP47-201ENST00000315781 DIEXFQ68CQ4 756 aaKnown RBP28.08■■■□□ 2.09
SNAP47-201ENST00000315781 PRDM2Q13029 1718 aa28.03■■■□□ 2.08
SNAP47-201ENST00000315781 CADPSQ9ULU8 1353 aa28.01■■■□□ 2.07
SNAP47-201ENST00000315781 CUX2O14529 1486 aa27.94■■■□□ 2.06
SNAP47-201ENST00000315781 SCAF1Q9H7N4 1312 aaKnown RBP27.93■■■□□ 2.06
SNAP47-201ENST00000315781 ZNF316A6NFI3 1004 aaPredicted RBP27.92■■■□□ 2.06
SNAP47-201ENST00000315781 KANK4Q5T7N3 995 aaPredicted RBP27.92■■■□□ 2.06
SNAP47-201ENST00000315781 IGF1RP08069 1367 aa27.88■■■□□ 2.05
SNAP47-201ENST00000315781 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
SNAP47-201ENST00000315781 ARHGAP35Q9NRY4 1499 aa27.87■■■□□ 2.05
SNAP47-201ENST00000315781 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
SNAP47-201ENST00000315781 CARMIL1Q5VZK9 1371 aa27.77■■■□□ 2.04
SNAP47-201ENST00000315781 ACIN1Q9UKV3 1341 aaKnown RBP27.75■■■□□ 2.03
SNAP47-201ENST00000315781 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
SNAP47-201ENST00000315781 RRBP1Q9P2E9 1410 aaKnown RBP27.72■■■□□ 2.03
SNAP47-201ENST00000315781 NEUROD1Q13562 356 aa27.71■■■□□ 2.03
SNAP47-201ENST00000315781 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
SNAP47-201ENST00000315781 CENPBP07199 599 aaPredicted RBP27.64■■■□□ 2.02
SNAP47-201ENST00000315781 CCNB3Q8WWL7 1395 aa27.63■■■□□ 2.01
SNAP47-201ENST00000315781 CLSPNQ9HAW4 1339 aa27.62■■■□□ 2.01
SNAP47-201ENST00000315781 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
SNAP47-201ENST00000315781 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
SNAP47-201ENST00000315781 NESP48681 1621 aa27.56■■■□□ 2
SNAP47-201ENST00000315781 TIAM1Q13009 1591 aa27.54■■■□□ 2
SNAP47-201ENST00000315781 TOPBP1Q92547 1522 aa27.54■■■□□ 2
SNAP47-201ENST00000315781 POLA1P09884 1462 aaPredicted RBP27.53■■■□□ 2
SNAP47-201ENST00000315781 ITGAEP38570 1179 aa27.52■■■□□ 2
SNAP47-201ENST00000315781 MAP3K1Q13233 1512 aa27.52■■■□□ 2
SNAP47-201ENST00000315781 ABCA10Q8WWZ4 1543 aa27.52■■■□□ 2
SNAP47-201ENST00000315781 MIER1Q8N108 512 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms