RNA–Protein interactions for RNA: ENST00000333503.7

PGP-201, Transcript of phosphoglycolate phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGP, Length 2,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGP-201ENST00000333503 NISCHQ9Y2I1 1504 aa39.32■■■■□ 3.88
PGP-201ENST00000333503 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
PGP-201ENST00000333503 ZCCHC6Q5VYS8 1495 aaKnown RBP33.09■■■□□ 2.89
PGP-201ENST00000333503 SHROOM4Q9ULL8 1493 aa33.08■■■□□ 2.89
PGP-201ENST00000333503 DCAF8L2P0C7V8 631 aa32.98■■■□□ 2.87
PGP-201ENST00000333503 DCAF1Q9Y4B6 1507 aa32.47■■■□□ 2.79
PGP-201ENST00000333503 ABCC9O60706 1549 aa32.16■■■□□ 2.74
PGP-201ENST00000333503 MYO15BQ96JP2 1530 aa32.15■■■□□ 2.74
PGP-201ENST00000333503 SUPT5HO00267 1087 aaKnown RBP32■■■□□ 2.71
PGP-201ENST00000333503 NACADO15069 1562 aa31.88■■■□□ 2.69
PGP-201ENST00000333503 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
PGP-201ENST00000333503 RB1CC1Q8TDY2 1594 aa31.59■■■□□ 2.65
PGP-201ENST00000333503 HRCP23327 699 aa31.55■■■□□ 2.64
PGP-201ENST00000333503 PPARGC1BQ86YN6 1023 aaKnown RBP31.11■■■□□ 2.57
PGP-201ENST00000333503 PCGF6Q9BYE7 350 aa31.02■■■□□ 2.56
PGP-201ENST00000333503 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
PGP-201ENST00000333503 RSF1Q96T23 1441 aaPredicted RBP30.82■■■□□ 2.52
PGP-201ENST00000333503 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.52
PGP-201ENST00000333503 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
PGP-201ENST00000333503 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
PGP-201ENST00000333503 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
PGP-201ENST00000333503 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
PGP-201ENST00000333503 WIZO95785 1651 aa30.4■■■□□ 2.46
PGP-201ENST00000333503 BAZ1AQ9NRL2 1556 aaPredicted RBP30.23■■■□□ 2.43
PGP-201ENST00000333503 SMARCA4P51532 1647 aa30.13■■■□□ 2.41
PGP-201ENST00000333503 PELP1Q8IZL8 1130 aaKnown RBP30.11■■■□□ 2.41
PGP-201ENST00000333503 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
PGP-201ENST00000333503 SCAF1Q9H7N4 1312 aaKnown RBP29.91■■■□□ 2.38
PGP-201ENST00000333503 TRIM26Q12899 539 aaPredicted RBP29.89■■■□□ 2.38
PGP-201ENST00000333503 TOP2AP11388 1531 aaKnown RBP29.82■■■□□ 2.36
PGP-201ENST00000333503 PEG3Q9GZU2 1588 aa29.82■■■□□ 2.36
PGP-201ENST00000333503 TRIM41Q8WV44 630 aa29.79■■■□□ 2.36
PGP-201ENST00000333503 CCDC88BA6NC98 1476 aa29.73■■■□□ 2.35
PGP-201ENST00000333503 SMARCA2P51531 1590 aa29.67■■■□□ 2.34
PGP-201ENST00000333503 EIF4G1Q04637 1599 aaKnown RBP29.67■■■□□ 2.34
PGP-201ENST00000333503 FAM9AQ8IZU1 332 aaPredicted RBP29.64■■■□□ 2.33
PGP-201ENST00000333503 ATAD2BQ9ULI0 1458 aa29.57■■■□□ 2.32
PGP-201ENST00000333503 ZEB1P37275 1124 aaPredicted RBP29.51■■■□□ 2.32
PGP-201ENST00000333503 EHMT2Q96KQ7 1210 aa29.5■■■□□ 2.31
PGP-201ENST00000333503 ABCC8Q09428 1581 aa29.45■■■□□ 2.3
PGP-201ENST00000333503 BAZ1BQ9UIG0 1483 aaKnown RBP29.44■■■□□ 2.3
PGP-201ENST00000333503 NCAPD3P42695 1498 aa29.38■■■□□ 2.29
PGP-201ENST00000333503 HMGXB3Q12766 1538 aa29.38■■■□□ 2.29
PGP-201ENST00000333503 CC2D2AQ9P2K1 1620 aa29.24■■■□□ 2.27
PGP-201ENST00000333503 NEUROD1Q13562 356 aa29.11■■■□□ 2.25
PGP-201ENST00000333503 ACIN1Q9UKV3 1341 aaKnown RBP29.1■■■□□ 2.25
PGP-201ENST00000333503 SOGA1O94964 1423 aa28.98■■■□□ 2.23
PGP-201ENST00000333503 WRNQ14191 1432 aaPredicted RBP eCLIP28.96■■■□□ 2.23
PGP-201ENST00000333503 RUSC2Q8N2Y8 1516 aa28.92■■■□□ 2.22
PGP-201ENST00000333503 GTF3C3Q9Y5Q9 886 aa28.92■■■□□ 2.22
PGP-201ENST00000333503 SYNJ1O43426 1573 aa28.9■■■□□ 2.22
PGP-201ENST00000333503 MYT1Q01538 1121 aa28.82■■■□□ 2.2
PGP-201ENST00000333503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.79■■■□□ 2.2
PGP-201ENST00000333503 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
PGP-201ENST00000333503 CFTRP13569 1480 aa28.68■■■□□ 2.18
PGP-201ENST00000333503 CSRNP3Q8WYN3 585 aa28.66■■■□□ 2.18
PGP-201ENST00000333503 CCER1Q8TC90 406 aaPredicted RBP28.64■■■□□ 2.18
PGP-201ENST00000333503 DIEXFQ68CQ4 756 aaKnown RBP28.64■■■□□ 2.18
PGP-201ENST00000333503 CENPBP07199 599 aaPredicted RBP28.63■■■□□ 2.17
PGP-201ENST00000333503 DNAJC5BQ9UF47 199 aa28.59■■■□□ 2.17
PGP-201ENST00000333503 CADPSQ9ULU8 1353 aa28.55■■■□□ 2.16
PGP-201ENST00000333503 TOP2BQ02880 1626 aa28.54■■■□□ 2.16
PGP-201ENST00000333503 CUX1P39880 1505 aa28.52■■■□□ 2.16
PGP-201ENST00000333503 UBTFP17480 764 aaKnown RBP28.52■■■□□ 2.16
PGP-201ENST00000333503 EEA1Q15075 1411 aa28.49■■■□□ 2.15
PGP-201ENST00000333503 BIVM-ERCC5R4GMW8 1640 aa28.44■■■□□ 2.14
PGP-201ENST00000333503 LAMC3Q9Y6N6 1575 aa28.43■■■□□ 2.14
PGP-201ENST00000333503 NESP48681 1621 aa28.41■■■□□ 2.14
PGP-201ENST00000333503 CEP162Q5TB80 1403 aa28.39■■■□□ 2.13
PGP-201ENST00000333503 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
PGP-201ENST00000333503 TNIKQ9UKE5 1360 aa28.34■■■□□ 2.13
PGP-201ENST00000333503 RANGAP1P46060 587 aaPredicted RBP28.33■■■□□ 2.13
PGP-201ENST00000333503 YTHDC1Q96MU7 727 aaKnown RBP28.31■■■□□ 2.12
PGP-201ENST00000333503 TTBK1Q5TCY1 1321 aaPredicted RBP28.3■■■□□ 2.12
PGP-201ENST00000333503 RAPGEF2Q9Y4G8 1499 aa28.3■■■□□ 2.12
PGP-201ENST00000333503 CEP164Q9UPV0 1460 aa28.26■■■□□ 2.11
PGP-201ENST00000333503 FANCD2Q9BXW9 1451 aa28.25■■■□□ 2.11
PGP-201ENST00000333503 KIF21BO75037 1637 aa28.22■■■□□ 2.11
PGP-201ENST00000333503 FGD5Q6ZNL6 1462 aa28.14■■■□□ 2.1
PGP-201ENST00000333503 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
PGP-201ENST00000333503 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
PGP-201ENST00000333503 CUX2O14529 1486 aa28.08■■■□□ 2.09
PGP-201ENST00000333503 ZNF316A6NFI3 1004 aaPredicted RBP28.07■■■□□ 2.08
PGP-201ENST00000333503 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
PGP-201ENST00000333503 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
PGP-201ENST00000333503 CLIP1P30622 1438 aa28.03■■■□□ 2.08
PGP-201ENST00000333503 KIF21AQ7Z4S6 1674 aa28.02■■■□□ 2.08
PGP-201ENST00000333503 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
PGP-201ENST00000333503 MIER1Q8N108 512 aa27.98■■■□□ 2.07
PGP-201ENST00000333503 TOPBP1Q92547 1522 aa27.97■■■□□ 2.07
PGP-201ENST00000333503 IGF1RP08069 1367 aa27.93■■■□□ 2.06
PGP-201ENST00000333503 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
PGP-201ENST00000333503 POLA1P09884 1462 aaPredicted RBP27.91■■■□□ 2.06
PGP-201ENST00000333503 ERICH3Q5RHP9 1530 aa27.89■■■□□ 2.06
PGP-201ENST00000333503 CARMIL1Q5VZK9 1371 aa27.79■■■□□ 2.04
PGP-201ENST00000333503 MRC2Q9UBG0 1479 aa27.78■■■□□ 2.04
PGP-201ENST00000333503 VPS8Q8N3P4 1428 aa27.77■■■□□ 2.04
PGP-201ENST00000333503 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
PGP-201ENST00000333503 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
PGP-201ENST00000333503 ARAP1Q96P48 1450 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms