RNA–Protein interactions for RNA: ENST00000265164.6

CASP6-201, Transcript of caspase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP6, Length 1,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-201ENST00000265164 NISCHQ9Y2I1 1504 aa48.21■■■■■ 5.31
CASP6-201ENST00000265164 CCDC180Q9P1Z9 1646 aa43.11■■■■■ 4.49
CASP6-201ENST00000265164 ABCC9O60706 1549 aa42.72■■■■■ 4.43
CASP6-201ENST00000265164 RB1CC1Q8TDY2 1594 aa40.81■■■■■ 4.12
CASP6-201ENST00000265164 NACADO15069 1562 aa40.6■■■■■ 4.09
CASP6-201ENST00000265164 DCAF8L2P0C7V8 631 aa40.47■■■■■ 4.07
CASP6-201ENST00000265164 MYO15BQ96JP2 1530 aa40.16■■■■■ 4.02
CASP6-201ENST00000265164 ZCCHC6Q5VYS8 1495 aaKnown RBP40.05■■■■■ 4
CASP6-201ENST00000265164 UNC13AQ9UPW8 1703 aa40.03■■■■■ 4
CASP6-201ENST00000265164 PABPN1Q86U42 306 aaKnown RBP eCLIP39.81■■■■□ 3.96
CASP6-201ENST00000265164 DCAF1Q9Y4B6 1507 aa39.81■■■■□ 3.96
CASP6-201ENST00000265164 DNAJC5BQ9UF47 199 aa39.72■■■■□ 3.95
CASP6-201ENST00000265164 BICRAQ9NZM4 1560 aa39.67■■■■□ 3.94
CASP6-201ENST00000265164 SCRIBQ14160 1630 aa39.35■■■■□ 3.89
CASP6-201ENST00000265164 SHROOM4Q9ULL8 1493 aa39.05■■■■□ 3.84
CASP6-201ENST00000265164 EIF4G1Q04637 1599 aaKnown RBP38.63■■■■□ 3.77
CASP6-201ENST00000265164 CC2D2AQ9P2K1 1620 aa38.63■■■■□ 3.77
CASP6-201ENST00000265164 CECR2Q9BXF3 1484 aa38.4■■■■□ 3.74
CASP6-201ENST00000265164 SMARCA4P51532 1647 aa37.56■■■■□ 3.6
CASP6-201ENST00000265164 NCAPD3P42695 1498 aa37.47■■■■□ 3.59
CASP6-201ENST00000265164 ATAD2BQ9ULI0 1458 aa37.45■■■■□ 3.59
CASP6-201ENST00000265164 BAZ1AQ9NRL2 1556 aaPredicted RBP37.38■■■■□ 3.57
CASP6-201ENST00000265164 SMARCA2P51531 1590 aa37.34■■■■□ 3.57
CASP6-201ENST00000265164 HMGXB3Q12766 1538 aa37.26■■■■□ 3.56
CASP6-201ENST00000265164 MROH2BQ7Z745 1585 aa37.18■■■■□ 3.54
CASP6-201ENST00000265164 PEG3Q9GZU2 1588 aa37.16■■■■□ 3.54
CASP6-201ENST00000265164 BAZ1BQ9UIG0 1483 aaKnown RBP37.1■■■■□ 3.53
CASP6-201ENST00000265164 NESP48681 1621 aa36.84■■■■□ 3.49
CASP6-201ENST00000265164 ERCC6Q03468 1493 aa36.81■■■■□ 3.48
CASP6-201ENST00000265164 WIZO95785 1651 aa36.8■■■■□ 3.48
CASP6-201ENST00000265164 LAMC3Q9Y6N6 1575 aa36.6■■■■□ 3.45
CASP6-201ENST00000265164 CUX2O14529 1486 aa36.59■■■■□ 3.45
CASP6-201ENST00000265164 RSF1Q96T23 1441 aaPredicted RBP36.52■■■■□ 3.44
CASP6-201ENST00000265164 KIF21AQ7Z4S6 1674 aa36.42■■■■□ 3.42
CASP6-201ENST00000265164 THOC2Q8NI27 1593 aaKnown RBP36.4■■■■□ 3.42
CASP6-201ENST00000265164 CADPSQ9ULU8 1353 aa36.34■■■■□ 3.41
CASP6-201ENST00000265164 PDS5BQ9NTI5 1447 aa36.32■■■■□ 3.4
CASP6-201ENST00000265164 TOP2AP11388 1531 aaKnown RBP36.3■■■■□ 3.4
CASP6-201ENST00000265164 DNAJC5Q9H3Z4 198 aa36.09■■■■□ 3.37
CASP6-201ENST00000265164 CFTRP13569 1480 aa36.05■■■■□ 3.36
CASP6-201ENST00000265164 MRC2Q9UBG0 1479 aa36.02■■■■□ 3.36
CASP6-201ENST00000265164 FANCD2Q9BXW9 1451 aa35.97■■■■□ 3.35
CASP6-201ENST00000265164 CEP164Q9UPV0 1460 aa35.96■■■■□ 3.35
CASP6-201ENST00000265164 WDR62O43379 1518 aa35.95■■■■□ 3.35
CASP6-201ENST00000265164 CCDC88BA6NC98 1476 aa35.89■■■■□ 3.34
CASP6-201ENST00000265164 PRDM2Q13029 1718 aa35.82■■■■□ 3.32
CASP6-201ENST00000265164 URB2Q14146 1524 aaKnown RBP35.68■■■■□ 3.3
CASP6-201ENST00000265164 TOPBP1Q92547 1522 aa35.35■■■■□ 3.25
CASP6-201ENST00000265164 DNMBPQ6XZF7 1577 aa35.26■■■■□ 3.23
CASP6-201ENST00000265164 SUPT5HO00267 1087 aaKnown RBP35.22■■■■□ 3.23
CASP6-201ENST00000265164 ABCC8Q09428 1581 aa35.21■■■■□ 3.23
CASP6-201ENST00000265164 IFT140Q96RY7 1462 aa35.2■■■■□ 3.23
CASP6-201ENST00000265164 ZNF608Q9ULD9 1512 aaPredicted RBP35.19■■■■□ 3.22
CASP6-201ENST00000265164 TARBP1Q13395 1621 aaKnown RBP35.04■■■■□ 3.2
CASP6-201ENST00000265164 EIF4G3O43432 1585 aaKnown RBP35.03■■■■□ 3.2
CASP6-201ENST00000265164 POLA1P09884 1462 aaPredicted RBP35.02■■■■□ 3.2
CASP6-201ENST00000265164 OSCARQ8IYS5 282 aa34.95■■■■□ 3.19
CASP6-201ENST00000265164 CUX1P39880 1505 aa34.91■■■■□ 3.18
CASP6-201ENST00000265164 AQRO60306 1485 aaKnown RBP eCLIP34.9■■■■□ 3.18
CASP6-201ENST00000265164 RAD54L2Q9Y4B4 1467 aa34.9■■■■□ 3.18
CASP6-201ENST00000265164 FGD5Q6ZNL6 1462 aa34.86■■■■□ 3.17
CASP6-201ENST00000265164 SOGA1O94964 1423 aa34.82■■■■□ 3.16
CASP6-201ENST00000265164 TDRD9Q8NDG6 1382 aaKnown RBP34.72■■■■□ 3.15
CASP6-201ENST00000265164 CHD1O14646 1710 aa34.72■■■■□ 3.15
CASP6-201ENST00000265164 TRIM41Q8WV44 630 aa34.71■■■■□ 3.15
CASP6-201ENST00000265164 WDR97A6NE52 1622 aa34.66■■■■□ 3.14
CASP6-201ENST00000265164 RIMBP3CA6NJZ7 1639 aa34.58■■■■□ 3.13
CASP6-201ENST00000265164 RIMBP3BA6NNM3 1639 aa34.58■■■■□ 3.13
CASP6-201ENST00000265164 RIMBP3Q9UFD9 1639 aa34.58■■■■□ 3.13
CASP6-201ENST00000265164 SNAPC4Q5SXM2 1469 aa34.55■■■■□ 3.12
CASP6-201ENST00000265164 FBLN2P98095 1184 aa34.54■■■■□ 3.12
CASP6-201ENST00000265164 ARHGEF11O15085 1522 aa34.48■■■■□ 3.11
CASP6-201ENST00000265164 PBRM1Q86U86 1689 aa34.47■■■■□ 3.11
CASP6-201ENST00000265164 GRIN2BQ13224 1484 aa34.47■■■■□ 3.11
CASP6-201ENST00000265164 BIVM-ERCC5R4GMW8 1640 aa34.47■■■■□ 3.11
CASP6-201ENST00000265164 ABCA10Q8WWZ4 1543 aa34.47■■■■□ 3.11
CASP6-201ENST00000265164 SYNJ1O43426 1573 aa34.46■■■■□ 3.11
CASP6-201ENST00000265164 TOP2BQ02880 1626 aa34.45■■■■□ 3.11
CASP6-201ENST00000265164 MAGI1Q96QZ7 1491 aaPredicted RBP34.44■■■■□ 3.1
CASP6-201ENST00000265164 WRNQ14191 1432 aaPredicted RBP eCLIP34.43■■■■□ 3.1
CASP6-201ENST00000265164 ABCA5Q8WWZ7 1642 aa34.43■■■■□ 3.1
CASP6-201ENST00000265164 GAPVD1Q14C86 1478 aa34.42■■■■□ 3.1
CASP6-201ENST00000265164 SYNJ2O15056 1496 aa34.33■■■■□ 3.09
CASP6-201ENST00000265164 CHMP7Q8WUX9 453 aaPredicted RBP34.32■■■■□ 3.08
CASP6-201ENST00000265164 CLASP1Q7Z460 1538 aa34.28■■■■□ 3.08
CASP6-201ENST00000265164 ARAP1Q96P48 1450 aa34.17■■■■□ 3.06
CASP6-201ENST00000265164 CYB5RLQ6IPT4 315 aa34.15■■■■□ 3.06
CASP6-201ENST00000265164 ADAMTS12P58397 1594 aa34.13■■■■□ 3.05
CASP6-201ENST00000265164 GRIN2AQ12879 1464 aa34.06■■■■□ 3.04
CASP6-201ENST00000265164 ERICH3Q5RHP9 1530 aa34.03■■■■□ 3.04
CASP6-201ENST00000265164 FHAD1B1AJZ9 1412 aa33.98■■■■□ 3.03
CASP6-201ENST00000265164 CEP170Q5SW79 1584 aa33.97■■■■□ 3.03
CASP6-201ENST00000265164 NUP160Q12769 1436 aa33.92■■■■□ 3.02
CASP6-201ENST00000265164 ERCC6L2Q5T890 1561 aa33.83■■■■□ 3.01
CASP6-201ENST00000265164 SHROOM2Q13796 1616 aa33.77■■■■□ 3
CASP6-201ENST00000265164 KIF27Q86VH2 1401 aa33.72■■■□□ 2.99
CASP6-201ENST00000265164 IGF1RP08069 1367 aa33.68■■■□□ 2.98
CASP6-201ENST00000265164 RUSC2Q8N2Y8 1516 aa33.66■■■□□ 2.98
CASP6-201ENST00000265164 CUL7Q14999 1698 aa33.65■■■□□ 2.98
CASP6-201ENST00000265164 TRHP20396 242 aaPredicted RBP33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms