Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFX6Q8HWS3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFX6Q8HWS3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFX6Q8HWS3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
RFX6Q8HWS3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
RFX6Q8HWS3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.45■□□□□ 0.86
RFX6Q8HWS3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.45■□□□□ 0.86
RFX6Q8HWS3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 AC091874.3-201ENST00000512672 1195 ntBASIC20.44■□□□□ 0.86
RFX6Q8HWS3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RFX6Q8HWS3 AC018553.1-201ENST00000616682 1458 ntBASIC20.43■□□□□ 0.86
RFX6Q8HWS3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.43■□□□□ 0.86
RFX6Q8HWS3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.43■□□□□ 0.86
RFX6Q8HWS3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RFX6Q8HWS3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 AC093484.2-201ENST00000580996 2166 ntBASIC20.42■□□□□ 0.86
RFX6Q8HWS3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 AC005829.2-201ENST00000571422 1056 ntBASIC20.42■□□□□ 0.86
RFX6Q8HWS3 AC006557.6-201ENST00000623071 864 ntBASIC20.42■□□□□ 0.86
RFX6Q8HWS3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.42■□□□□ 0.86
RFX6Q8HWS3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.41■□□□□ 0.86
RFX6Q8HWS3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 MIR4758-201ENST00000577688 71 ntBASIC20.41■□□□□ 0.86
RFX6Q8HWS3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
RFX6Q8HWS3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 1138.7 ms