RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 NISCHQ9Y2I1 1504 aa45.73■■■■■ 4.91
SSBP2-218ENST00000514493 CCDC180Q9P1Z9 1646 aa40.22■■■■■ 4.03
SSBP2-218ENST00000514493 ABCC9O60706 1549 aa38.47■■■■□ 3.75
SSBP2-218ENST00000514493 ZCCHC6Q5VYS8 1495 aaKnown RBP38.38■■■■□ 3.74
SSBP2-218ENST00000514493 DCAF1Q9Y4B6 1507 aa37.9■■■■□ 3.66
SSBP2-218ENST00000514493 MYO15BQ96JP2 1530 aa37.61■■■■□ 3.61
SSBP2-218ENST00000514493 DCAF8L2P0C7V8 631 aa37.6■■■■□ 3.61
SSBP2-218ENST00000514493 NACADO15069 1562 aa37.46■■■■□ 3.59
SSBP2-218ENST00000514493 RB1CC1Q8TDY2 1594 aa37.23■■■■□ 3.55
SSBP2-218ENST00000514493 SHROOM4Q9ULL8 1493 aa36.84■■■■□ 3.49
SSBP2-218ENST00000514493 SCRIBQ14160 1630 aa36.8■■■■□ 3.48
SSBP2-218ENST00000514493 UNC13AQ9UPW8 1703 aa36.56■■■■□ 3.44
SSBP2-218ENST00000514493 PABPN1Q86U42 306 aaKnown RBP eCLIP36.12■■■■□ 3.37
SSBP2-218ENST00000514493 BICRAQ9NZM4 1560 aa36.1■■■■□ 3.37
SSBP2-218ENST00000514493 CECR2Q9BXF3 1484 aa35.49■■■■□ 3.27
SSBP2-218ENST00000514493 BAZ1AQ9NRL2 1556 aaPredicted RBP35.38■■■■□ 3.25
SSBP2-218ENST00000514493 SMARCA4P51532 1647 aa35.29■■■■□ 3.24
SSBP2-218ENST00000514493 MROH2BQ7Z745 1585 aa35.28■■■■□ 3.24
SSBP2-218ENST00000514493 RSF1Q96T23 1441 aaPredicted RBP35.26■■■■□ 3.24
SSBP2-218ENST00000514493 SUPT5HO00267 1087 aaKnown RBP35.2■■■■□ 3.23
SSBP2-218ENST00000514493 DNAJC5BQ9UF47 199 aa35.16■■■■□ 3.22
SSBP2-218ENST00000514493 EIF4G1Q04637 1599 aaKnown RBP35.03■■■■□ 3.2
SSBP2-218ENST00000514493 WIZO95785 1651 aa35.02■■■■□ 3.2
SSBP2-218ENST00000514493 PEG3Q9GZU2 1588 aa34.91■■■■□ 3.18
SSBP2-218ENST00000514493 SMARCA2P51531 1590 aa34.77■■■■□ 3.16
SSBP2-218ENST00000514493 CC2D2AQ9P2K1 1620 aa34.74■■■■□ 3.15
SSBP2-218ENST00000514493 ATAD2BQ9ULI0 1458 aa34.73■■■■□ 3.15
SSBP2-218ENST00000514493 TOP2AP11388 1531 aaKnown RBP34.68■■■■□ 3.14
SSBP2-218ENST00000514493 BAZ1BQ9UIG0 1483 aaKnown RBP34.53■■■■□ 3.12
SSBP2-218ENST00000514493 HMGXB3Q12766 1538 aa34.53■■■■□ 3.12
SSBP2-218ENST00000514493 NCAPD3P42695 1498 aa34.5■■■■□ 3.11
SSBP2-218ENST00000514493 CCDC88BA6NC98 1476 aa34.22■■■■□ 3.07
SSBP2-218ENST00000514493 PRDM2Q13029 1718 aa33.66■■■□□ 2.98
SSBP2-218ENST00000514493 CFTRP13569 1480 aa33.64■■■□□ 2.98
SSBP2-218ENST00000514493 CADPSQ9ULU8 1353 aa33.55■■■□□ 2.96
SSBP2-218ENST00000514493 CHIC1Q5VXU3 224 aa33.55■■■□□ 2.96
SSBP2-218ENST00000514493 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
SSBP2-218ENST00000514493 NESP48681 1621 aa33.43■■■□□ 2.94
SSBP2-218ENST00000514493 ABCC8Q09428 1581 aa33.39■■■□□ 2.94
SSBP2-218ENST00000514493 WRNQ14191 1432 aaPredicted RBP eCLIP33.22■■■□□ 2.91
SSBP2-218ENST00000514493 FANCD2Q9BXW9 1451 aa33.21■■■□□ 2.91
SSBP2-218ENST00000514493 TRIM41Q8WV44 630 aa33.16■■■□□ 2.9
SSBP2-218ENST00000514493 SYNJ1O43426 1573 aa33.16■■■□□ 2.9
SSBP2-218ENST00000514493 PDS5BQ9NTI5 1447 aa33.13■■■□□ 2.89
SSBP2-218ENST00000514493 KIF21AQ7Z4S6 1674 aa33.12■■■□□ 2.89
SSBP2-218ENST00000514493 BIVM-ERCC5R4GMW8 1640 aa33.11■■■□□ 2.89
SSBP2-218ENST00000514493 TOP2BQ02880 1626 aa33.08■■■□□ 2.89
SSBP2-218ENST00000514493 CEP164Q9UPV0 1460 aa33.08■■■□□ 2.89
SSBP2-218ENST00000514493 CUX1P39880 1505 aa33.04■■■□□ 2.88
SSBP2-218ENST00000514493 ERCC6Q03468 1493 aa33.03■■■□□ 2.88
SSBP2-218ENST00000514493 DNMBPQ6XZF7 1577 aa32.92■■■□□ 2.86
SSBP2-218ENST00000514493 URB2Q14146 1524 aaKnown RBP32.83■■■□□ 2.85
SSBP2-218ENST00000514493 TOPBP1Q92547 1522 aa32.83■■■□□ 2.85
SSBP2-218ENST00000514493 MRC2Q9UBG0 1479 aa32.78■■■□□ 2.84
SSBP2-218ENST00000514493 FGD5Q6ZNL6 1462 aa32.73■■■□□ 2.83
SSBP2-218ENST00000514493 THOC2Q8NI27 1593 aaKnown RBP32.7■■■□□ 2.83
SSBP2-218ENST00000514493 WDR62O43379 1518 aa32.66■■■□□ 2.82
SSBP2-218ENST00000514493 POLA1P09884 1462 aaPredicted RBP32.64■■■□□ 2.82
SSBP2-218ENST00000514493 SOGA1O94964 1423 aa32.62■■■□□ 2.81
SSBP2-218ENST00000514493 EEA1Q15075 1411 aa32.58■■■□□ 2.81
SSBP2-218ENST00000514493 RUSC2Q8N2Y8 1516 aa32.52■■■□□ 2.8
SSBP2-218ENST00000514493 WDR97A6NE52 1622 aa32.51■■■□□ 2.8
SSBP2-218ENST00000514493 FAM9AQ8IZU1 332 aaPredicted RBP32.48■■■□□ 2.79
SSBP2-218ENST00000514493 CUX2O14529 1486 aa32.48■■■□□ 2.79
SSBP2-218ENST00000514493 RAD54L2Q9Y4B4 1467 aa32.46■■■□□ 2.79
SSBP2-218ENST00000514493 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
SSBP2-218ENST00000514493 TARBP1Q13395 1621 aaKnown RBP32.42■■■□□ 2.78
SSBP2-218ENST00000514493 KIF27Q86VH2 1401 aa32.42■■■□□ 2.78
SSBP2-218ENST00000514493 IFT140Q96RY7 1462 aa32.31■■■□□ 2.76
SSBP2-218ENST00000514493 ABCA5Q8WWZ7 1642 aa32.3■■■□□ 2.76
SSBP2-218ENST00000514493 CSRNP3Q8WYN3 585 aa32.29■■■□□ 2.76
SSBP2-218ENST00000514493 KIF21BO75037 1637 aa32.24■■■□□ 2.75
SSBP2-218ENST00000514493 LOC105371045A0A1W2PR82 267 aa32.16■■■□□ 2.74
SSBP2-218ENST00000514493 GAPVD1Q14C86 1478 aa32.14■■■□□ 2.74
SSBP2-218ENST00000514493 PBRM1Q86U86 1689 aa32.13■■■□□ 2.73
SSBP2-218ENST00000514493 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
SSBP2-218ENST00000514493 PRXQ9BXM0 1461 aa32.11■■■□□ 2.73
SSBP2-218ENST00000514493 IGF1RP08069 1367 aa32.1■■■□□ 2.73
SSBP2-218ENST00000514493 ERICH3Q5RHP9 1530 aa32.1■■■□□ 2.73
SSBP2-218ENST00000514493 GOLGA3Q08378 1498 aa32.09■■■□□ 2.73
SSBP2-218ENST00000514493 CUL7Q14999 1698 aa32.09■■■□□ 2.73
SSBP2-218ENST00000514493 ZNF608Q9ULD9 1512 aaPredicted RBP32.09■■■□□ 2.73
SSBP2-218ENST00000514493 EIF4G3O43432 1585 aaKnown RBP32.09■■■□□ 2.73
SSBP2-218ENST00000514493 AQRO60306 1485 aaKnown RBP eCLIP32.02■■■□□ 2.72
SSBP2-218ENST00000514493 RAPGEF2Q9Y4G8 1499 aa32.02■■■□□ 2.72
SSBP2-218ENST00000514493 EHMT2Q96KQ7 1210 aa31.99■■■□□ 2.71
SSBP2-218ENST00000514493 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
SSBP2-218ENST00000514493 CARMIL1Q5VZK9 1371 aa31.96■■■□□ 2.71
SSBP2-218ENST00000514493 ADAMTS12P58397 1594 aa31.9■■■□□ 2.7
SSBP2-218ENST00000514493 TNIKQ9UKE5 1360 aa31.86■■■□□ 2.69
SSBP2-218ENST00000514493 UBTFP17480 764 aaKnown RBP31.81■■■□□ 2.68
SSBP2-218ENST00000514493 SNAPC4Q5SXM2 1469 aa31.8■■■□□ 2.68
SSBP2-218ENST00000514493 FHAD1B1AJZ9 1412 aa31.79■■■□□ 2.68
SSBP2-218ENST00000514493 MAGI1Q96QZ7 1491 aaPredicted RBP31.78■■■□□ 2.68
SSBP2-218ENST00000514493 CTTNBP2Q8WZ74 1663 aa31.71■■■□□ 2.67
SSBP2-218ENST00000514493 CEP162Q5TB80 1403 aa31.69■■■□□ 2.66
SSBP2-218ENST00000514493 SYNJ2O15056 1496 aa31.64■■■□□ 2.65
SSBP2-218ENST00000514493 GRIN2AQ12879 1464 aa31.59■■■□□ 2.65
SSBP2-218ENST00000514493 CLIP1P30622 1438 aa31.52■■■□□ 2.64
SSBP2-218ENST00000514493 CHD1O14646 1710 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms