RNA–Protein interactions for RNA: ENST00000370888.5

LRRC1-202, Transcript of leucine rich repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-202ENST00000370888 NISCHQ9Y2I1 1504 aa39.46■■■■□ 3.91
LRRC1-202ENST00000370888 SHROOM4Q9ULL8 1493 aa34.4■■■■□ 3.1
LRRC1-202ENST00000370888 SUPT5HO00267 1087 aaKnown RBP33.84■■■■□ 3.01
LRRC1-202ENST00000370888 ZCCHC6Q5VYS8 1495 aaKnown RBP33.37■■■□□ 2.93
LRRC1-202ENST00000370888 DCAF8L2P0C7V8 631 aa33.37■■■□□ 2.93
LRRC1-202ENST00000370888 CCDC180Q9P1Z9 1646 aa33.16■■■□□ 2.9
LRRC1-202ENST00000370888 CHIC1Q5VXU3 224 aa32.74■■■□□ 2.83
LRRC1-202ENST00000370888 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
LRRC1-202ENST00000370888 PCGF6Q9BYE7 350 aa32.18■■■□□ 2.74
LRRC1-202ENST00000370888 DCAF1Q9Y4B6 1507 aa32.1■■■□□ 2.73
LRRC1-202ENST00000370888 HRCP23327 699 aa32.09■■■□□ 2.73
LRRC1-202ENST00000370888 LOC105371045A0A1W2PR82 267 aa32.02■■■□□ 2.72
LRRC1-202ENST00000370888 PPARGC1BQ86YN6 1023 aaKnown RBP31.7■■■□□ 2.67
LRRC1-202ENST00000370888 SCRIBQ14160 1630 aa31.58■■■□□ 2.65
LRRC1-202ENST00000370888 ABCC9O60706 1549 aa31.51■■■□□ 2.64
LRRC1-202ENST00000370888 RSF1Q96T23 1441 aaPredicted RBP31.43■■■□□ 2.62
LRRC1-202ENST00000370888 FAM9AQ8IZU1 332 aaPredicted RBP31.36■■■□□ 2.61
LRRC1-202ENST00000370888 TRIM41Q8WV44 630 aa31.33■■■□□ 2.61
LRRC1-202ENST00000370888 EHMT2Q96KQ7 1210 aa31.31■■■□□ 2.6
LRRC1-202ENST00000370888 TRIM26Q12899 539 aaPredicted RBP31.27■■■□□ 2.6
LRRC1-202ENST00000370888 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
LRRC1-202ENST00000370888 CECR2Q9BXF3 1484 aa30.98■■■□□ 2.55
LRRC1-202ENST00000370888 MROH2BQ7Z745 1585 aa30.82■■■□□ 2.52
LRRC1-202ENST00000370888 NACADO15069 1562 aa30.74■■■□□ 2.51
LRRC1-202ENST00000370888 WIZO95785 1651 aa30.66■■■□□ 2.5
LRRC1-202ENST00000370888 ZEB1P37275 1124 aaPredicted RBP30.54■■■□□ 2.48
LRRC1-202ENST00000370888 TTBK1Q5TCY1 1321 aaPredicted RBP30.31■■■□□ 2.44
LRRC1-202ENST00000370888 BAZ1AQ9NRL2 1556 aaPredicted RBP30.29■■■□□ 2.44
LRRC1-202ENST00000370888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.23■■■□□ 2.43
LRRC1-202ENST00000370888 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
LRRC1-202ENST00000370888 CCER1Q8TC90 406 aaPredicted RBP30.1■■■□□ 2.41
LRRC1-202ENST00000370888 CCDC88BA6NC98 1476 aa30.1■■■□□ 2.41
LRRC1-202ENST00000370888 EIF4G1Q04637 1599 aaKnown RBP30.09■■■□□ 2.41
LRRC1-202ENST00000370888 TOP2AP11388 1531 aaKnown RBP30.02■■■□□ 2.4
LRRC1-202ENST00000370888 PABPN1Q86U42 306 aaKnown RBP eCLIP30.01■■■□□ 2.39
LRRC1-202ENST00000370888 SMARCA4P51532 1647 aa29.98■■■□□ 2.39
LRRC1-202ENST00000370888 SOGA1O94964 1423 aa29.97■■■□□ 2.39
LRRC1-202ENST00000370888 SMARCA2P51531 1590 aa29.92■■■□□ 2.38
LRRC1-202ENST00000370888 UBTFP17480 764 aaKnown RBP29.9■■■□□ 2.38
LRRC1-202ENST00000370888 CEP162Q5TB80 1403 aa29.86■■■□□ 2.37
LRRC1-202ENST00000370888 SCAF1Q9H7N4 1312 aaKnown RBP29.82■■■□□ 2.36
LRRC1-202ENST00000370888 RUSC2Q8N2Y8 1516 aa29.82■■■□□ 2.36
LRRC1-202ENST00000370888 CSRNP3Q8WYN3 585 aa29.8■■■□□ 2.36
LRRC1-202ENST00000370888 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
LRRC1-202ENST00000370888 TNIKQ9UKE5 1360 aa29.69■■■□□ 2.34
LRRC1-202ENST00000370888 WRNQ14191 1432 aaPredicted RBP eCLIP29.66■■■□□ 2.34
LRRC1-202ENST00000370888 DIEXFQ68CQ4 756 aaKnown RBP29.56■■■□□ 2.32
LRRC1-202ENST00000370888 RANGAP1P46060 587 aaPredicted RBP29.55■■■□□ 2.32
LRRC1-202ENST00000370888 EEA1Q15075 1411 aa29.52■■■□□ 2.32
LRRC1-202ENST00000370888 GOLGA3Q08378 1498 aa29.48■■■□□ 2.31
LRRC1-202ENST00000370888 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
LRRC1-202ENST00000370888 HNRNPUL2Q1KMD3 747 aaKnown RBP29.44■■■□□ 2.3
LRRC1-202ENST00000370888 NEUROD1Q13562 356 aa29.44■■■□□ 2.3
LRRC1-202ENST00000370888 ACIN1Q9UKV3 1341 aaKnown RBP29.39■■■□□ 2.29
LRRC1-202ENST00000370888 SYNJ1O43426 1573 aa29.35■■■□□ 2.29
LRRC1-202ENST00000370888 CEP164Q9UPV0 1460 aa29.27■■■□□ 2.28
LRRC1-202ENST00000370888 CLIP1P30622 1438 aa29.27■■■□□ 2.28
LRRC1-202ENST00000370888 ATAD2BQ9ULI0 1458 aa29.25■■■□□ 2.27
LRRC1-202ENST00000370888 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
LRRC1-202ENST00000370888 APLP2Q06481 763 aa29.21■■■□□ 2.27
LRRC1-202ENST00000370888 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
LRRC1-202ENST00000370888 ZNF316A6NFI3 1004 aaPredicted RBP29.2■■■□□ 2.26
LRRC1-202ENST00000370888 GTF3C3Q9Y5Q9 886 aa29.18■■■□□ 2.26
LRRC1-202ENST00000370888 CENPBP07199 599 aaPredicted RBP29.17■■■□□ 2.26
LRRC1-202ENST00000370888 RAPGEF2Q9Y4G8 1499 aa29.17■■■□□ 2.26
LRRC1-202ENST00000370888 YTHDC1Q96MU7 727 aaKnown RBP29.14■■■□□ 2.26
LRRC1-202ENST00000370888 PELP1Q8IZL8 1130 aaKnown RBP29.12■■■□□ 2.25
LRRC1-202ENST00000370888 KIF21BO75037 1637 aa29.09■■■□□ 2.25
LRRC1-202ENST00000370888 VPS8Q8N3P4 1428 aa29.07■■■□□ 2.24
LRRC1-202ENST00000370888 MIER1Q8N108 512 aa28.94■■■□□ 2.22
LRRC1-202ENST00000370888 TOP2BQ02880 1626 aa28.84■■■□□ 2.21
LRRC1-202ENST00000370888 KANK4Q5T7N3 995 aaPredicted RBP28.81■■■□□ 2.2
LRRC1-202ENST00000370888 PRXQ9BXM0 1461 aa28.69■■■□□ 2.18
LRRC1-202ENST00000370888 ITGAEP38570 1179 aa28.68■■■□□ 2.18
LRRC1-202ENST00000370888 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
LRRC1-202ENST00000370888 BIVM-ERCC5R4GMW8 1640 aa28.64■■■□□ 2.17
LRRC1-202ENST00000370888 CUX1P39880 1505 aa28.64■■■□□ 2.17
LRRC1-202ENST00000370888 DHX57Q6P158 1386 aaKnown RBP28.59■■■□□ 2.17
LRRC1-202ENST00000370888 KIF27Q86VH2 1401 aa28.59■■■□□ 2.17
LRRC1-202ENST00000370888 ERICH3Q5RHP9 1530 aa28.58■■■□□ 2.17
LRRC1-202ENST00000370888 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
LRRC1-202ENST00000370888 HMGXB3Q12766 1538 aa28.45■■■□□ 2.14
LRRC1-202ENST00000370888 CFTRP13569 1480 aa28.42■■■□□ 2.14
LRRC1-202ENST00000370888 ARHGAP35Q9NRY4 1499 aa28.42■■■□□ 2.14
LRRC1-202ENST00000370888 CLSPNQ9HAW4 1339 aa28.39■■■□□ 2.14
LRRC1-202ENST00000370888 CCNB3Q8WWL7 1395 aa28.39■■■□□ 2.14
LRRC1-202ENST00000370888 CUX2O14529 1486 aa28.36■■■□□ 2.13
LRRC1-202ENST00000370888 RRBP1Q9P2E9 1410 aaKnown RBP28.36■■■□□ 2.13
LRRC1-202ENST00000370888 ATP1B4Q9UN42 357 aaPredicted RBP28.34■■■□□ 2.13
LRRC1-202ENST00000370888 P3H3Q8IVL6 736 aa28.33■■■□□ 2.13
LRRC1-202ENST00000370888 IGF1RP08069 1367 aa28.3■■■□□ 2.12
LRRC1-202ENST00000370888 FAM50AQ14320 339 aaKnown RBP28.22■■■□□ 2.11
LRRC1-202ENST00000370888 CARMIL1Q5VZK9 1371 aa28.21■■■□□ 2.11
LRRC1-202ENST00000370888 RAB3GAP2Q9H2M9 1393 aa28.21■■■□□ 2.11
LRRC1-202ENST00000370888 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
LRRC1-202ENST00000370888 FGD5Q6ZNL6 1462 aa28.14■■■□□ 2.1
LRRC1-202ENST00000370888 SIN3AQ96ST3 1273 aa28.1■■■□□ 2.09
LRRC1-202ENST00000370888 PHLDB1Q86UU1 1377 aa28.1■■■□□ 2.09
LRRC1-202ENST00000370888 KCNH8Q96L42 1107 aa28.09■■■□□ 2.09
LRRC1-202ENST00000370888 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms