Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 MIR219A2-201ENST00000608502 1504 ntBASIC13.81□□□□□ -0.2
VPS25Q9BRG1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VPS25Q9BRG1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 MIR600HG-201ENST00000449175 5984 ntBASIC13.8□□□□□ -0.2
VPS25Q9BRG1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VPS25Q9BRG1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.79□□□□□ -0.2
VPS25Q9BRG1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VPS25Q9BRG1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms