RNA–Protein interactions for RNA: ENST00000307826.4

MGAT1-201, Transcript of mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MGAT1, Length 2,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MGAT1-201ENST00000307826 NISCHQ9Y2I1 1504 aa32.27■■■□□ 2.76
MGAT1-201ENST00000307826 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.1
MGAT1-201ENST00000307826 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
MGAT1-201ENST00000307826 HRCP23327 699 aa27.41■■□□□ 1.98
MGAT1-201ENST00000307826 ZCCHC6Q5VYS8 1495 aaKnown RBP27.31■■□□□ 1.96
MGAT1-201ENST00000307826 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
MGAT1-201ENST00000307826 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
MGAT1-201ENST00000307826 PPARGC1BQ86YN6 1023 aaKnown RBP26.97■■□□□ 1.91
MGAT1-201ENST00000307826 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
MGAT1-201ENST00000307826 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
MGAT1-201ENST00000307826 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
MGAT1-201ENST00000307826 PELP1Q8IZL8 1130 aaKnown RBP26.71■■□□□ 1.87
MGAT1-201ENST00000307826 LOC105371045A0A1W2PR82 267 aa26.32■■□□□ 1.8
MGAT1-201ENST00000307826 DCAF1Q9Y4B6 1507 aa26.22■■□□□ 1.79
MGAT1-201ENST00000307826 SCAF1Q9H7N4 1312 aaKnown RBP26.12■■□□□ 1.77
MGAT1-201ENST00000307826 SCRIBQ14160 1630 aa25.82■■□□□ 1.72
MGAT1-201ENST00000307826 ABCC9O60706 1549 aa25.81■■□□□ 1.72
MGAT1-201ENST00000307826 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
MGAT1-201ENST00000307826 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
MGAT1-201ENST00000307826 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
MGAT1-201ENST00000307826 MYT1Q01538 1121 aa25.7■■□□□ 1.71
MGAT1-201ENST00000307826 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
MGAT1-201ENST00000307826 TRIM41Q8WV44 630 aa25.64■■□□□ 1.69
MGAT1-201ENST00000307826 ZEB1P37275 1124 aaPredicted RBP25.62■■□□□ 1.69
MGAT1-201ENST00000307826 RB1CC1Q8TDY2 1594 aa25.57■■□□□ 1.68
MGAT1-201ENST00000307826 CECR2Q9BXF3 1484 aa25.37■■□□□ 1.65
MGAT1-201ENST00000307826 ACIN1Q9UKV3 1341 aaKnown RBP25.37■■□□□ 1.65
MGAT1-201ENST00000307826 NEUROD1Q13562 356 aa25.33■■□□□ 1.65
MGAT1-201ENST00000307826 GTF3C3Q9Y5Q9 886 aa25.24■■□□□ 1.63
MGAT1-201ENST00000307826 MROH2BQ7Z745 1585 aa25.24■■□□□ 1.63
MGAT1-201ENST00000307826 WIZO95785 1651 aa25.13■■□□□ 1.61
MGAT1-201ENST00000307826 NACADO15069 1562 aa25.05■■□□□ 1.6
MGAT1-201ENST00000307826 CENPBP07199 599 aaPredicted RBP25.03■■□□□ 1.6
MGAT1-201ENST00000307826 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
MGAT1-201ENST00000307826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.86■■□□□ 1.57
MGAT1-201ENST00000307826 DIEXFQ68CQ4 756 aaKnown RBP24.85■■□□□ 1.57
MGAT1-201ENST00000307826 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
MGAT1-201ENST00000307826 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
MGAT1-201ENST00000307826 CCER1Q8TC90 406 aaPredicted RBP24.76■■□□□ 1.55
MGAT1-201ENST00000307826 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
MGAT1-201ENST00000307826 CCDC88BA6NC98 1476 aa24.68■■□□□ 1.54
MGAT1-201ENST00000307826 YTHDC1Q96MU7 727 aaKnown RBP24.61■■□□□ 1.53
MGAT1-201ENST00000307826 SOGA1O94964 1423 aa24.57■■□□□ 1.52
MGAT1-201ENST00000307826 TOP2AP11388 1531 aaKnown RBP24.54■■□□□ 1.52
MGAT1-201ENST00000307826 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
MGAT1-201ENST00000307826 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
MGAT1-201ENST00000307826 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
MGAT1-201ENST00000307826 CEP162Q5TB80 1403 aa24.48■■□□□ 1.51
MGAT1-201ENST00000307826 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
MGAT1-201ENST00000307826 UBTFP17480 764 aaKnown RBP24.45■■□□□ 1.5
MGAT1-201ENST00000307826 UNC13AQ9UPW8 1703 aa24.42■■□□□ 1.5
MGAT1-201ENST00000307826 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
MGAT1-201ENST00000307826 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
MGAT1-201ENST00000307826 TNIKQ9UKE5 1360 aa24.31■■□□□ 1.48
MGAT1-201ENST00000307826 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
MGAT1-201ENST00000307826 MIER1Q8N108 512 aa24.2■■□□□ 1.46
MGAT1-201ENST00000307826 BCL11AQ9H165 835 aa24.19■■□□□ 1.46
MGAT1-201ENST00000307826 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
MGAT1-201ENST00000307826 HNRNPUL2Q1KMD3 747 aaKnown RBP24.15■■□□□ 1.46
MGAT1-201ENST00000307826 GOLGA3Q08378 1498 aa24.13■■□□□ 1.45
MGAT1-201ENST00000307826 EEA1Q15075 1411 aa24.12■■□□□ 1.45
MGAT1-201ENST00000307826 BICRAQ9NZM4 1560 aa24.1■■□□□ 1.45
MGAT1-201ENST00000307826 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
MGAT1-201ENST00000307826 ANP32EQ9BTT0 268 aa24.03■■□□□ 1.44
MGAT1-201ENST00000307826 CLIP1P30622 1438 aa23.96■■□□□ 1.43
MGAT1-201ENST00000307826 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
MGAT1-201ENST00000307826 SUPT16HQ9Y5B9 1047 aaKnown RBP23.92■■□□□ 1.42
MGAT1-201ENST00000307826 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
MGAT1-201ENST00000307826 TSHZ2Q9NRE2 1034 aa23.88■■□□□ 1.41
MGAT1-201ENST00000307826 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
MGAT1-201ENST00000307826 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
MGAT1-201ENST00000307826 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
MGAT1-201ENST00000307826 APLP2Q06481 763 aa23.84■■□□□ 1.41
MGAT1-201ENST00000307826 KIF21BO75037 1637 aa23.84■■□□□ 1.41
MGAT1-201ENST00000307826 VPS8Q8N3P4 1428 aa23.82■■□□□ 1.4
MGAT1-201ENST00000307826 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
MGAT1-201ENST00000307826 KANK4Q5T7N3 995 aaPredicted RBP23.64■■□□□ 1.37
MGAT1-201ENST00000307826 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
MGAT1-201ENST00000307826 BCANQ96GW7 911 aa23.53■■□□□ 1.36
MGAT1-201ENST00000307826 ARAP1Q96P48 1450 aa23.52■■□□□ 1.36
MGAT1-201ENST00000307826 ITGAEP38570 1179 aa23.49■■□□□ 1.35
MGAT1-201ENST00000307826 PRXQ9BXM0 1461 aa23.48■■□□□ 1.35
MGAT1-201ENST00000307826 DHX57Q6P158 1386 aaKnown RBP23.48■■□□□ 1.35
MGAT1-201ENST00000307826 BIVM-ERCC5R4GMW8 1640 aa23.45■■□□□ 1.35
MGAT1-201ENST00000307826 CUX1P39880 1505 aa23.43■■□□□ 1.34
MGAT1-201ENST00000307826 ERICH3Q5RHP9 1530 aa23.39■■□□□ 1.33
MGAT1-201ENST00000307826 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
MGAT1-201ENST00000307826 PRKCSHP14314 528 aaPredicted RBP23.31■■□□□ 1.32
MGAT1-201ENST00000307826 RBM19Q9Y4C8 960 aaKnown RBP23.3■■□□□ 1.32
MGAT1-201ENST00000307826 FKBP8Q14318 412 aa23.3■■□□□ 1.32
MGAT1-201ENST00000307826 ARHGAP35Q9NRY4 1499 aa23.29■■□□□ 1.32
MGAT1-201ENST00000307826 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
MGAT1-201ENST00000307826 RRBP1Q9P2E9 1410 aaKnown RBP23.26■■□□□ 1.31
MGAT1-201ENST00000307826 CCNB3Q8WWL7 1395 aa23.25■■□□□ 1.31
MGAT1-201ENST00000307826 KCNH8Q96L42 1107 aa23.25■■□□□ 1.31
MGAT1-201ENST00000307826 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
MGAT1-201ENST00000307826 CFTRP13569 1480 aa23.21■■□□□ 1.31
MGAT1-201ENST00000307826 P3H3Q8IVL6 736 aa23.17■■□□□ 1.3
MGAT1-201ENST00000307826 CUX2O14529 1486 aa23.17■■□□□ 1.3
MGAT1-201ENST00000307826 IGF1RP08069 1367 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms