RNA–Protein interactions for RNA: ENST00000262585.6

DENND3-201, Transcript of DENN domain containing 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene DENND3, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-201ENST00000262585 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
DENND3-201ENST00000262585 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
DENND3-201ENST00000262585 SUPT5HO00267 1087 aaKnown RBP28.31■■■□□ 2.12
DENND3-201ENST00000262585 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
DENND3-201ENST00000262585 EHMT2Q96KQ7 1210 aa27.09■■□□□ 1.93
DENND3-201ENST00000262585 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
DENND3-201ENST00000262585 PCGF6Q9BYE7 350 aa26.44■■□□□ 1.82
DENND3-201ENST00000262585 TRIM41Q8WV44 630 aa26.14■■□□□ 1.78
DENND3-201ENST00000262585 TTBK1Q5TCY1 1321 aaPredicted RBP26.13■■□□□ 1.77
DENND3-201ENST00000262585 APLP2Q06481 763 aa25.95■■□□□ 1.74
DENND3-201ENST00000262585 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
DENND3-201ENST00000262585 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
DENND3-201ENST00000262585 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.7
DENND3-201ENST00000262585 PPARGC1BQ86YN6 1023 aaKnown RBP25.6■■□□□ 1.69
DENND3-201ENST00000262585 UBTFP17480 764 aaKnown RBP25.58■■□□□ 1.69
DENND3-201ENST00000262585 CCER1Q8TC90 406 aaPredicted RBP25.54■■□□□ 1.68
DENND3-201ENST00000262585 ZEB1P37275 1124 aaPredicted RBP25.47■■□□□ 1.67
DENND3-201ENST00000262585 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
DENND3-201ENST00000262585 HRCP23327 699 aa25.3■■□□□ 1.64
DENND3-201ENST00000262585 ATP1B4Q9UN42 357 aaPredicted RBP25.25■■□□□ 1.63
DENND3-201ENST00000262585 ABCC9O60706 1549 aa25.09■■□□□ 1.61
DENND3-201ENST00000262585 PELP1Q8IZL8 1130 aaKnown RBP25.07■■□□□ 1.6
DENND3-201ENST00000262585 CENPBP07199 599 aaPredicted RBP25.04■■□□□ 1.6
DENND3-201ENST00000262585 PABPN1Q86U42 306 aaKnown RBP eCLIP24.88■■□□□ 1.57
DENND3-201ENST00000262585 YTHDC1Q96MU7 727 aaKnown RBP24.88■■□□□ 1.57
DENND3-201ENST00000262585 HNRNPUL2Q1KMD3 747 aaKnown RBP24.79■■□□□ 1.56
DENND3-201ENST00000262585 ITGAEP38570 1179 aa24.75■■□□□ 1.55
DENND3-201ENST00000262585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.72■■□□□ 1.55
DENND3-201ENST00000262585 ZCCHC6Q5VYS8 1495 aaKnown RBP24.71■■□□□ 1.55
DENND3-201ENST00000262585 SCRIBQ14160 1630 aa24.36■■□□□ 1.49
DENND3-201ENST00000262585 DIEXFQ68CQ4 756 aaKnown RBP24.3■■□□□ 1.48
DENND3-201ENST00000262585 NEFLP07196 543 aa24.25■■□□□ 1.47
DENND3-201ENST00000262585 CCDC180Q9P1Z9 1646 aa24.25■■□□□ 1.47
DENND3-201ENST00000262585 CSRNP3Q8WYN3 585 aa24.2■■□□□ 1.46
DENND3-201ENST00000262585 FAM50AQ14320 339 aaKnown RBP24.13■■□□□ 1.45
DENND3-201ENST00000262585 ERICH6Q7L0X2 663 aa24.08■■□□□ 1.45
DENND3-201ENST00000262585 MYO15BQ96JP2 1530 aa24.08■■□□□ 1.44
DENND3-201ENST00000262585 POLR3GLQ9BT43 218 aa24.07■■□□□ 1.44
DENND3-201ENST00000262585 CNGB1Q14028 1251 aaPredicted RBP24.02■■□□□ 1.44
DENND3-201ENST00000262585 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
DENND3-201ENST00000262585 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
DENND3-201ENST00000262585 P3H3Q8IVL6 736 aa23.91■■□□□ 1.42
DENND3-201ENST00000262585 RSF1Q96T23 1441 aaPredicted RBP23.89■■□□□ 1.42
DENND3-201ENST00000262585 MYT1LQ9UL68 1186 aa23.85■■□□□ 1.41
DENND3-201ENST00000262585 ZNF316A6NFI3 1004 aaPredicted RBP23.83■■□□□ 1.41
DENND3-201ENST00000262585 TRIM52Q96A61 297 aa23.81■■□□□ 1.4
DENND3-201ENST00000262585 GTF3C3Q9Y5Q9 886 aa23.78■■□□□ 1.4
DENND3-201ENST00000262585 ARID3CA6NKF2 412 aa23.68■■□□□ 1.38
DENND3-201ENST00000262585 FBLN2P98095 1184 aa23.63■■□□□ 1.37
DENND3-201ENST00000262585 ACIN1Q9UKV3 1341 aaKnown RBP23.56■■□□□ 1.36
DENND3-201ENST00000262585 BCANQ96GW7 911 aa23.52■■□□□ 1.36
DENND3-201ENST00000262585 ZNF326Q5BKZ1 582 aaKnown RBP23.52■■□□□ 1.36
DENND3-201ENST00000262585 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
DENND3-201ENST00000262585 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
DENND3-201ENST00000262585 ANP32CO43423 234 aa23.47■■□□□ 1.35
DENND3-201ENST00000262585 NACADO15069 1562 aa23.43■■□□□ 1.34
DENND3-201ENST00000262585 MYT1Q01538 1121 aa23.42■■□□□ 1.34
DENND3-201ENST00000262585 CLIP1P30622 1438 aa23.38■■□□□ 1.33
DENND3-201ENST00000262585 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
DENND3-201ENST00000262585 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.33
DENND3-201ENST00000262585 ZNF777Q9ULD5 760 aaPredicted RBP23.32■■□□□ 1.32
DENND3-201ENST00000262585 WRNQ14191 1432 aaPredicted RBP eCLIP23.29■■□□□ 1.32
DENND3-201ENST00000262585 GOLGA3Q08378 1498 aa23.22■■□□□ 1.31
DENND3-201ENST00000262585 DDX10Q13206 875 aaKnown RBP23.22■■□□□ 1.31
DENND3-201ENST00000262585 EEA1Q15075 1411 aa23.22■■□□□ 1.31
DENND3-201ENST00000262585 CHIC2Q9UKJ5 165 aa23.2■■□□□ 1.3
DENND3-201ENST00000262585 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
DENND3-201ENST00000262585 DAXXQ9UER7 740 aaPredicted RBP23.18■■□□□ 1.3
DENND3-201ENST00000262585 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
DENND3-201ENST00000262585 MIER1Q8N108 512 aa23.17■■□□□ 1.3
DENND3-201ENST00000262585 MROH2BQ7Z745 1585 aa23.16■■□□□ 1.3
DENND3-201ENST00000262585 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
DENND3-201ENST00000262585 TONSLQ96HA7 1378 aa23.15■■□□□ 1.3
DENND3-201ENST00000262585 CDK11AQ9UQ88 783 aaPredicted RBP23.14■■□□□ 1.3
DENND3-201ENST00000262585 SOGA1O94964 1423 aa23.12■■□□□ 1.29
DENND3-201ENST00000262585 SCAF1Q9H7N4 1312 aaKnown RBP23.11■■□□□ 1.29
DENND3-201ENST00000262585 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
DENND3-201ENST00000262585 MTUS2Q5JR59 1369 aa23.03■■□□□ 1.28
DENND3-201ENST00000262585 CEP164Q9UPV0 1460 aa23.02■■□□□ 1.27
DENND3-201ENST00000262585 FKBP8Q14318 412 aa22.99■■□□□ 1.27
DENND3-201ENST00000262585 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
DENND3-201ENST00000262585 CCDC88BA6NC98 1476 aa22.96■■□□□ 1.27
DENND3-201ENST00000262585 KIF27Q86VH2 1401 aa22.95■■□□□ 1.26
DENND3-201ENST00000262585 ABCC8Q09428 1581 aa22.95■■□□□ 1.26
DENND3-201ENST00000262585 HNRNPUQ00839 825 aaKnown RBP eCLIP22.94■■□□□ 1.26
DENND3-201ENST00000262585 RRP7BPQ9NSQ0 103 aa22.92■■□□□ 1.26
DENND3-201ENST00000262585 FAM9BQ8IZU0 186 aa22.9■■□□□ 1.26
DENND3-201ENST00000262585 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.24
DENND3-201ENST00000262585 WIZO95785 1651 aa22.83■■□□□ 1.24
DENND3-201ENST00000262585 RTL5Q5HYW3 569 aaPredicted RBP22.82■■□□□ 1.24
DENND3-201ENST00000262585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.8■■□□□ 1.24
DENND3-201ENST00000262585 SIN3AQ96ST3 1273 aa22.77■■□□□ 1.24
DENND3-201ENST00000262585 KDM2AQ9Y2K7 1162 aa22.77■■□□□ 1.24
DENND3-201ENST00000262585 SALL2Q9Y467 1007 aaPredicted RBP22.75■■□□□ 1.23
DENND3-201ENST00000262585 TSPY4P0CV99 314 aa22.74■■□□□ 1.23
DENND3-201ENST00000262585 TSPY10P0CW01 314 aa22.74■■□□□ 1.23
DENND3-201ENST00000262585 KANK4Q5T7N3 995 aaPredicted RBP22.71■■□□□ 1.23
DENND3-201ENST00000262585 MRS2Q9HD23 443 aa22.69■■□□□ 1.22
DENND3-201ENST00000262585 CHGAP10645 457 aaKnown RBP22.68■■□□□ 1.22
DENND3-201ENST00000262585 CUX2O14529 1486 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms