RNA–Protein interactions for RNA: ENST00000628140.2

PIK3CD-208, Transcript of phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, humanhuman

TSL 5 BASIC

Gene PIK3CD, Length 5,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CD-208ENST00000628140 DCAF8L2P0C7V8 631 aa26.74■■□□□ 1.87
PIK3CD-208ENST00000628140 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
PIK3CD-208ENST00000628140 SUPT5HO00267 1087 aaKnown RBP25.05■■□□□ 1.6
PIK3CD-208ENST00000628140 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
PIK3CD-208ENST00000628140 PELP1Q8IZL8 1130 aaKnown RBP24.32■■□□□ 1.48
PIK3CD-208ENST00000628140 EHMT2Q96KQ7 1210 aa24.22■■□□□ 1.47
PIK3CD-208ENST00000628140 PCGF6Q9BYE7 350 aa23.65■■□□□ 1.38
PIK3CD-208ENST00000628140 APLP2Q06481 763 aa23.64■■□□□ 1.38
PIK3CD-208ENST00000628140 FAM9AQ8IZU1 332 aaPredicted RBP23.63■■□□□ 1.37
PIK3CD-208ENST00000628140 CENPBP07199 599 aaPredicted RBP23.54■■□□□ 1.36
PIK3CD-208ENST00000628140 MYT1Q01538 1121 aa23.53■■□□□ 1.36
PIK3CD-208ENST00000628140 ZEB1P37275 1124 aaPredicted RBP23.52■■□□□ 1.36
PIK3CD-208ENST00000628140 TTBK1Q5TCY1 1321 aaPredicted RBP23.31■■□□□ 1.32
PIK3CD-208ENST00000628140 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
PIK3CD-208ENST00000628140 ERICH6Q7L0X2 663 aa23.23■■□□□ 1.31
PIK3CD-208ENST00000628140 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
PIK3CD-208ENST00000628140 CCER1Q8TC90 406 aaPredicted RBP23.17■■□□□ 1.3
PIK3CD-208ENST00000628140 ATP1B4Q9UN42 357 aaPredicted RBP23.07■■□□□ 1.28
PIK3CD-208ENST00000628140 UBTFP17480 764 aaKnown RBP22.95■■□□□ 1.27
PIK3CD-208ENST00000628140 HRCP23327 699 aa22.84■■□□□ 1.25
PIK3CD-208ENST00000628140 NEFLP07196 543 aa22.79■■□□□ 1.24
PIK3CD-208ENST00000628140 YTHDC1Q96MU7 727 aaKnown RBP22.73■■□□□ 1.23
PIK3CD-208ENST00000628140 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
PIK3CD-208ENST00000628140 ABCC9O60706 1549 aa22.58■■□□□ 1.2
PIK3CD-208ENST00000628140 PPARGC1BQ86YN6 1023 aaKnown RBP22.44■■□□□ 1.18
PIK3CD-208ENST00000628140 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.185e-7■□□□□ 10.2
PIK3CD-208ENST00000628140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
PIK3CD-208ENST00000628140 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
PIK3CD-208ENST00000628140 MYT1LQ9UL68 1186 aa22.27■■□□□ 1.16
PIK3CD-208ENST00000628140 ITGAEP38570 1179 aa22.18■■□□□ 1.14
PIK3CD-208ENST00000628140 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.14
PIK3CD-208ENST00000628140 LOC105371045A0A1W2PR82 267 aa22.12■■□□□ 1.13
PIK3CD-208ENST00000628140 DAXXQ9UER7 740 aaPredicted RBP22.05■■□□□ 1.12
PIK3CD-208ENST00000628140 DIEXFQ68CQ4 756 aaKnown RBP22.02■■□□□ 1.11
PIK3CD-208ENST00000628140 POLR3GLQ9BT43 218 aa21.84■■□□□ 1.09
PIK3CD-208ENST00000628140 RTL5Q5HYW3 569 aaPredicted RBP21.83■■□□□ 1.09
PIK3CD-208ENST00000628140 GTF3C3Q9Y5Q9 886 aa21.8■■□□□ 1.08
PIK3CD-208ENST00000628140 FBLN2P98095 1184 aa21.75■■□□□ 1.07
PIK3CD-208ENST00000628140 FAM50AQ14320 339 aaKnown RBP21.66■■□□□ 1.06
PIK3CD-208ENST00000628140 CNGB1Q14028 1251 aaPredicted RBP21.61■■□□□ 1.05
PIK3CD-208ENST00000628140 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.04
PIK3CD-208ENST00000628140 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
PIK3CD-208ENST00000628140 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.03
PIK3CD-208ENST00000628140 TRIM52Q96A61 297 aa21.51■■□□□ 1.03
PIK3CD-208ENST00000628140 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
PIK3CD-208ENST00000628140 BCANQ96GW7 911 aa21.46■■□□□ 1.03
PIK3CD-208ENST00000628140 CDK11AQ9UQ88 783 aaPredicted RBP21.45■■□□□ 1.02
PIK3CD-208ENST00000628140 P3H3Q8IVL6 736 aa21.4■■□□□ 1.02
PIK3CD-208ENST00000628140 CLSPNQ9HAW4 1339 aa21.4■■□□□ 1.02
PIK3CD-208ENST00000628140 ARID3CA6NKF2 412 aa21.38■■□□□ 1.01
PIK3CD-208ENST00000628140 ANP32CO43423 234 aa21.34■■□□□ 1.01
PIK3CD-208ENST00000628140 NEUROD1Q13562 356 aa21.32■■□□□ 1
PIK3CD-208ENST00000628140 ZCCHC6Q5VYS8 1495 aaKnown RBP21.32■■□□□ 1
PIK3CD-208ENST00000628140 CSRNP3Q8WYN3 585 aa21.31■■□□□ 1
PIK3CD-208ENST00000628140 ZNF326Q5BKZ1 582 aaKnown RBP21.23■□□□□ 0.99
PIK3CD-208ENST00000628140 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
PIK3CD-208ENST00000628140 ZNF777Q9ULD5 760 aaPredicted RBP21.15■□□□□ 0.98
PIK3CD-208ENST00000628140 ANP32AP39687 249 aaKnown RBP21.1■□□□□ 0.97
PIK3CD-208ENST00000628140 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
PIK3CD-208ENST00000628140 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
PIK3CD-208ENST00000628140 NPM1P06748 294 aaKnown RBP eCLIP20.97■□□□□ 0.95
PIK3CD-208ENST00000628140 FKBP8Q14318 412 aa20.94■□□□□ 0.94
PIK3CD-208ENST00000628140 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
PIK3CD-208ENST00000628140 ESF1Q9H501 851 aaKnown RBP20.91■□□□□ 0.94
PIK3CD-208ENST00000628140 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
PIK3CD-208ENST00000628140 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.93
PIK3CD-208ENST00000628140 EIF5BO60841 1220 aaKnown RBP20.82■□□□□ 0.92
PIK3CD-208ENST00000628140 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
PIK3CD-208ENST00000628140 NPM2Q86SE8 214 aaKnown RBP20.81■□□□□ 0.92
PIK3CD-208ENST00000628140 CANXP27824 592 aaKnown RBP20.79■□□□□ 0.92
PIK3CD-208ENST00000628140 CHGAP10645 457 aaKnown RBP20.78■□□□□ 0.92
PIK3CD-208ENST00000628140 STAG3Q9UJ98 1225 aa20.76■□□□□ 0.91
PIK3CD-208ENST00000628140 SLC24A1O60721 1099 aa20.75■□□□□ 0.91
PIK3CD-208ENST00000628140 NACADO15069 1562 aa20.74■□□□□ 0.91
PIK3CD-208ENST00000628140 GLIPR1L2Q4G1C9 344 aa20.74■□□□□ 0.91
PIK3CD-208ENST00000628140 HNRNPUQ00839 825 aaKnown RBP eCLIP20.7■□□□□ 0.9
PIK3CD-208ENST00000628140 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
PIK3CD-208ENST00000628140 NEFMP07197 916 aa20.67■□□□□ 0.9
PIK3CD-208ENST00000628140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.66■□□□□ 0.97e-6■□□□□ 10.8
PIK3CD-208ENST00000628140 ANP32BQ92688 251 aaKnown RBP20.65■□□□□ 0.9
PIK3CD-208ENST00000628140 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.9
PIK3CD-208ENST00000628140 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.89
PIK3CD-208ENST00000628140 DDX10Q13206 875 aaKnown RBP20.62■□□□□ 0.89
PIK3CD-208ENST00000628140 TONSLQ96HA7 1378 aa20.61■□□□□ 0.89
PIK3CD-208ENST00000628140 MTUS2Q5JR59 1369 aa20.61■□□□□ 0.89
PIK3CD-208ENST00000628140 TSPY4P0CV99 314 aa20.6■□□□□ 0.89
PIK3CD-208ENST00000628140 TSPY10P0CW01 314 aa20.6■□□□□ 0.89
PIK3CD-208ENST00000628140 MIER1Q8N108 512 aa20.59■□□□□ 0.89
PIK3CD-208ENST00000628140 NBR1Q14596 966 aa20.58■□□□□ 0.89
PIK3CD-208ENST00000628140 CCDC136Q96JN2 1154 aa20.55■□□□□ 0.88
PIK3CD-208ENST00000628140 UPF2Q9HAU5 1272 aaKnown RBP20.55■□□□□ 0.88
PIK3CD-208ENST00000628140 BCL11AQ9H165 835 aa20.54■□□□□ 0.88
PIK3CD-208ENST00000628140 KCNH8Q96L42 1107 aa20.53■□□□□ 0.88
PIK3CD-208ENST00000628140 ANP32EQ9BTT0 268 aa20.53■□□□□ 0.88
PIK3CD-208ENST00000628140 FAM9BQ8IZU0 186 aa20.52■□□□□ 0.88
PIK3CD-208ENST00000628140 CLIP1P30622 1438 aa20.52■□□□□ 0.87
PIK3CD-208ENST00000628140 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
PIK3CD-208ENST00000628140 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
PIK3CD-208ENST00000628140 HSP90AA1P07900 732 aaKnown RBP20.46■□□□□ 0.87
PIK3CD-208ENST00000628140 PLEKHD1A6NEE1 506 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms