RNA–Protein interactions for RNA: ENST00000633844.1

PNMA6E-202, Transcript of PNMA family member 6E, humanhuman

TSL 3 BASIC

Gene PNMA6E, Length 2,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6E-202ENST00000633844 NISCHQ9Y2I1 1504 aa36.31■■■■□ 3.4
PNMA6E-202ENST00000633844 CCDC180Q9P1Z9 1646 aa31.18■■■□□ 2.58
PNMA6E-202ENST00000633844 DCAF8L2P0C7V8 631 aa30.69■■■□□ 2.5
PNMA6E-202ENST00000633844 SHROOM4Q9ULL8 1493 aa30.53■■■□□ 2.48
PNMA6E-202ENST00000633844 ZCCHC6Q5VYS8 1495 aaKnown RBP30.5■■■□□ 2.47
PNMA6E-202ENST00000633844 ABCC9O60706 1549 aa29.92■■■□□ 2.38
PNMA6E-202ENST00000633844 DCAF1Q9Y4B6 1507 aa29.68■■■□□ 2.34
PNMA6E-202ENST00000633844 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
PNMA6E-202ENST00000633844 SCRIBQ14160 1630 aa29.25■■■□□ 2.27
PNMA6E-202ENST00000633844 MYO15BQ96JP2 1530 aa29.14■■■□□ 2.26
PNMA6E-202ENST00000633844 NACADO15069 1562 aa29.1■■■□□ 2.25
PNMA6E-202ENST00000633844 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
PNMA6E-202ENST00000633844 PABPN1Q86U42 306 aaKnown RBP eCLIP28.51■■■□□ 2.15
PNMA6E-202ENST00000633844 CECR2Q9BXF3 1484 aa28.48■■■□□ 2.15
PNMA6E-202ENST00000633844 RSF1Q96T23 1441 aaPredicted RBP28.42■■■□□ 2.14
PNMA6E-202ENST00000633844 UNC13AQ9UPW8 1703 aa28.39■■■□□ 2.14
PNMA6E-202ENST00000633844 MROH2BQ7Z745 1585 aa28.23■■■□□ 2.11
PNMA6E-202ENST00000633844 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.1
PNMA6E-202ENST00000633844 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
PNMA6E-202ENST00000633844 WIZO95785 1651 aa28.03■■■□□ 2.08
PNMA6E-202ENST00000633844 BAZ1AQ9NRL2 1556 aaPredicted RBP27.94■■■□□ 2.06
PNMA6E-202ENST00000633844 SMARCA4P51532 1647 aa27.83■■■□□ 2.05
PNMA6E-202ENST00000633844 TOP2AP11388 1531 aaKnown RBP27.5■■□□□ 1.99
PNMA6E-202ENST00000633844 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
PNMA6E-202ENST00000633844 CCDC88BA6NC98 1476 aa27.45■■□□□ 1.98
PNMA6E-202ENST00000633844 LOC105371045A0A1W2PR82 267 aa27.38■■□□□ 1.97
PNMA6E-202ENST00000633844 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
PNMA6E-202ENST00000633844 FAM9AQ8IZU1 332 aaPredicted RBP27.35■■□□□ 1.97
PNMA6E-202ENST00000633844 SMARCA2P51531 1590 aa27.35■■□□□ 1.97
PNMA6E-202ENST00000633844 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
PNMA6E-202ENST00000633844 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.96
PNMA6E-202ENST00000633844 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.95
PNMA6E-202ENST00000633844 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
PNMA6E-202ENST00000633844 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
PNMA6E-202ENST00000633844 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
PNMA6E-202ENST00000633844 PELP1Q8IZL8 1130 aaKnown RBP26.93■■□□□ 1.9
PNMA6E-202ENST00000633844 CC2D2AQ9P2K1 1620 aa26.85■■□□□ 1.89
PNMA6E-202ENST00000633844 HMGXB3Q12766 1538 aa26.84■■□□□ 1.89
PNMA6E-202ENST00000633844 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
PNMA6E-202ENST00000633844 SOGA1O94964 1423 aa26.71■■□□□ 1.87
PNMA6E-202ENST00000633844 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.86
PNMA6E-202ENST00000633844 RUSC2Q8N2Y8 1516 aa26.64■■□□□ 1.85
PNMA6E-202ENST00000633844 SYNJ1O43426 1573 aa26.62■■□□□ 1.85
PNMA6E-202ENST00000633844 CFTRP13569 1480 aa26.52■■□□□ 1.84
PNMA6E-202ENST00000633844 CSRNP3Q8WYN3 585 aa26.47■■□□□ 1.83
PNMA6E-202ENST00000633844 CADPSQ9ULU8 1353 aa26.45■■□□□ 1.82
PNMA6E-202ENST00000633844 PCGF6Q9BYE7 350 aa26.42■■□□□ 1.82
PNMA6E-202ENST00000633844 UBTFP17480 764 aaKnown RBP26.37■■□□□ 1.81
PNMA6E-202ENST00000633844 NESP48681 1621 aa26.37■■□□□ 1.81
PNMA6E-202ENST00000633844 CUX1P39880 1505 aa26.32■■□□□ 1.8
PNMA6E-202ENST00000633844 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
PNMA6E-202ENST00000633844 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
PNMA6E-202ENST00000633844 EEA1Q15075 1411 aa26.24■■□□□ 1.79
PNMA6E-202ENST00000633844 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
PNMA6E-202ENST00000633844 HRCP23327 699 aa26.2■■□□□ 1.79
PNMA6E-202ENST00000633844 BIVM-ERCC5R4GMW8 1640 aa26.19■■□□□ 1.78
PNMA6E-202ENST00000633844 FANCD2Q9BXW9 1451 aa26.19■■□□□ 1.78
PNMA6E-202ENST00000633844 MYT1Q01538 1121 aa26.19■■□□□ 1.78
PNMA6E-202ENST00000633844 PRDM2Q13029 1718 aa26.12■■□□□ 1.77
PNMA6E-202ENST00000633844 CEP162Q5TB80 1403 aa26.09■■□□□ 1.77
PNMA6E-202ENST00000633844 TTBK1Q5TCY1 1321 aaPredicted RBP26.09■■□□□ 1.77
PNMA6E-202ENST00000633844 GOLGA3Q08378 1498 aa26.08■■□□□ 1.77
PNMA6E-202ENST00000633844 RAPGEF2Q9Y4G8 1499 aa26.07■■□□□ 1.76
PNMA6E-202ENST00000633844 TNIKQ9UKE5 1360 aa26.07■■□□□ 1.76
PNMA6E-202ENST00000633844 CEP164Q9UPV0 1460 aa26.03■■□□□ 1.76
PNMA6E-202ENST00000633844 FGD5Q6ZNL6 1462 aa26.02■■□□□ 1.76
PNMA6E-202ENST00000633844 TRIM26Q12899 539 aaPredicted RBP26.01■■□□□ 1.75
PNMA6E-202ENST00000633844 KIF27Q86VH2 1401 aa25.98■■□□□ 1.75
PNMA6E-202ENST00000633844 CUX2O14529 1486 aa25.98■■□□□ 1.75
PNMA6E-202ENST00000633844 LAMC3Q9Y6N6 1575 aa25.94■■□□□ 1.74
PNMA6E-202ENST00000633844 RAD54L2Q9Y4B4 1467 aa25.93■■□□□ 1.74
PNMA6E-202ENST00000633844 KIF21BO75037 1637 aa25.92■■□□□ 1.74
PNMA6E-202ENST00000633844 TOPBP1Q92547 1522 aa25.89■■□□□ 1.74
PNMA6E-202ENST00000633844 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
PNMA6E-202ENST00000633844 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
PNMA6E-202ENST00000633844 POLA1P09884 1462 aaPredicted RBP25.84■■□□□ 1.73
PNMA6E-202ENST00000633844 PRXQ9BXM0 1461 aa25.84■■□□□ 1.73
PNMA6E-202ENST00000633844 DNMBPQ6XZF7 1577 aa25.83■■□□□ 1.73
PNMA6E-202ENST00000633844 IGF1RP08069 1367 aa25.82■■□□□ 1.72
PNMA6E-202ENST00000633844 CLIP1P30622 1438 aa25.81■■□□□ 1.72
PNMA6E-202ENST00000633844 KIF21AQ7Z4S6 1674 aa25.81■■□□□ 1.72
PNMA6E-202ENST00000633844 TDRD9Q8NDG6 1382 aaKnown RBP25.73■■□□□ 1.71
PNMA6E-202ENST00000633844 CARMIL1Q5VZK9 1371 aa25.71■■□□□ 1.71
PNMA6E-202ENST00000633844 ERICH3Q5RHP9 1530 aa25.67■■□□□ 1.7
PNMA6E-202ENST00000633844 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.69
PNMA6E-202ENST00000633844 P3H3Q8IVL6 736 aa25.54■■□□□ 1.68
PNMA6E-202ENST00000633844 VPS8Q8N3P4 1428 aa25.53■■□□□ 1.68
PNMA6E-202ENST00000633844 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
PNMA6E-202ENST00000633844 APLP2Q06481 763 aa25.51■■□□□ 1.67
PNMA6E-202ENST00000633844 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
PNMA6E-202ENST00000633844 SCAF1Q9H7N4 1312 aaKnown RBP25.49■■□□□ 1.67
PNMA6E-202ENST00000633844 ARAP1Q96P48 1450 aa25.48■■□□□ 1.67
PNMA6E-202ENST00000633844 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
PNMA6E-202ENST00000633844 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.67
PNMA6E-202ENST00000633844 ARHGAP35Q9NRY4 1499 aa25.42■■□□□ 1.66
PNMA6E-202ENST00000633844 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
PNMA6E-202ENST00000633844 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
PNMA6E-202ENST00000633844 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
PNMA6E-202ENST00000633844 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
PNMA6E-202ENST00000633844 ATP1B4Q9UN42 357 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms