RNA–Protein interactions for RNA: ENST00000434054.6

CLCN2-204, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCN2, Length 2,897 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-204ENST00000434054 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
CLCN2-204ENST00000434054 CCDC180Q9P1Z9 1646 aa30.31■■■□□ 2.44
CLCN2-204ENST00000434054 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
CLCN2-204ENST00000434054 DCAF8L2P0C7V8 631 aa29.91■■■□□ 2.38
CLCN2-204ENST00000434054 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
CLCN2-204ENST00000434054 ZCCHC6Q5VYS8 1495 aaKnown RBP29.51■■■□□ 2.32
CLCN2-204ENST00000434054 ABCC9O60706 1549 aa29.31■■■□□ 2.28
CLCN2-204ENST00000434054 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.22
CLCN2-204ENST00000434054 HRCP23327 699 aa28.84■■■□□ 2.21
CLCN2-204ENST00000434054 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
CLCN2-204ENST00000434054 PCGF6Q9BYE7 350 aa28.77■■■□□ 2.2
CLCN2-204ENST00000434054 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
CLCN2-204ENST00000434054 PPARGC1BQ86YN6 1023 aaKnown RBP28.58■■■□□ 2.17
CLCN2-204ENST00000434054 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
CLCN2-204ENST00000434054 NACADO15069 1562 aa28.36■■■□□ 2.13
CLCN2-204ENST00000434054 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
CLCN2-204ENST00000434054 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
CLCN2-204ENST00000434054 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.05
CLCN2-204ENST00000434054 TRIM26Q12899 539 aaPredicted RBP27.76■■■□□ 2.03
CLCN2-204ENST00000434054 EHMT2Q96KQ7 1210 aa27.61■■■□□ 2.01
CLCN2-204ENST00000434054 CECR2Q9BXF3 1484 aa27.6■■■□□ 2.01
CLCN2-204ENST00000434054 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
CLCN2-204ENST00000434054 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
CLCN2-204ENST00000434054 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
CLCN2-204ENST00000434054 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
CLCN2-204ENST00000434054 BICRAQ9NZM4 1560 aa27.38■■□□□ 1.97
CLCN2-204ENST00000434054 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
CLCN2-204ENST00000434054 ZEB1P37275 1124 aaPredicted RBP27.19■■□□□ 1.94
CLCN2-204ENST00000434054 WIZO95785 1651 aa27.12■■□□□ 1.93
CLCN2-204ENST00000434054 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
CLCN2-204ENST00000434054 SCAF1Q9H7N4 1312 aaKnown RBP27.09■■□□□ 1.93
CLCN2-204ENST00000434054 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
CLCN2-204ENST00000434054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
CLCN2-204ENST00000434054 TTBK1Q5TCY1 1321 aaPredicted RBP26.79■■□□□ 1.88
CLCN2-204ENST00000434054 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
CLCN2-204ENST00000434054 PELP1Q8IZL8 1130 aaKnown RBP26.7■■□□□ 1.87
CLCN2-204ENST00000434054 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
CLCN2-204ENST00000434054 ATAD2BQ9ULI0 1458 aa26.63■■□□□ 1.85
CLCN2-204ENST00000434054 EIF4G1Q04637 1599 aaKnown RBP26.62■■□□□ 1.85
CLCN2-204ENST00000434054 NEUROD1Q13562 356 aa26.59■■□□□ 1.85
CLCN2-204ENST00000434054 CCDC88BA6NC98 1476 aa26.57■■□□□ 1.84
CLCN2-204ENST00000434054 BAZ1BQ9UIG0 1483 aaKnown RBP26.56■■□□□ 1.84
CLCN2-204ENST00000434054 ACIN1Q9UKV3 1341 aaKnown RBP26.51■■□□□ 1.83
CLCN2-204ENST00000434054 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
CLCN2-204ENST00000434054 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
CLCN2-204ENST00000434054 DIEXFQ68CQ4 756 aaKnown RBP26.44■■□□□ 1.82
CLCN2-204ENST00000434054 GTF3C3Q9Y5Q9 886 aa26.39■■□□□ 1.81
CLCN2-204ENST00000434054 NCAPD3P42695 1498 aa26.27■■□□□ 1.8
CLCN2-204ENST00000434054 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
CLCN2-204ENST00000434054 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
CLCN2-204ENST00000434054 CENPBP07199 599 aaPredicted RBP26.2■■□□□ 1.78
CLCN2-204ENST00000434054 YTHDC1Q96MU7 727 aaKnown RBP26.17■■□□□ 1.78
CLCN2-204ENST00000434054 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
CLCN2-204ENST00000434054 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
CLCN2-204ENST00000434054 CEP162Q5TB80 1403 aa26.11■■□□□ 1.77
CLCN2-204ENST00000434054 SOGA1O94964 1423 aa26.1■■□□□ 1.77
CLCN2-204ENST00000434054 DNAJC5BQ9UF47 199 aa26.07■■□□□ 1.76
CLCN2-204ENST00000434054 ZNF316A6NFI3 1004 aaPredicted RBP25.98■■□□□ 1.75
CLCN2-204ENST00000434054 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
CLCN2-204ENST00000434054 HNRNPUL2Q1KMD3 747 aaKnown RBP25.98■■□□□ 1.75
CLCN2-204ENST00000434054 WRNQ14191 1432 aaPredicted RBP eCLIP25.96■■□□□ 1.75
CLCN2-204ENST00000434054 CSRNP3Q8WYN3 585 aa25.94■■□□□ 1.74
CLCN2-204ENST00000434054 TNIKQ9UKE5 1360 aa25.88■■□□□ 1.73
CLCN2-204ENST00000434054 MIER1Q8N108 512 aa25.87■■□□□ 1.73
CLCN2-204ENST00000434054 RANGAP1P46060 587 aaPredicted RBP25.85■■□□□ 1.73
CLCN2-204ENST00000434054 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
CLCN2-204ENST00000434054 CFTRP13569 1480 aa25.76■■□□□ 1.72
CLCN2-204ENST00000434054 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
CLCN2-204ENST00000434054 NESP48681 1621 aa25.73■■□□□ 1.71
CLCN2-204ENST00000434054 GOLGA3Q08378 1498 aa25.63■■□□□ 1.69
CLCN2-204ENST00000434054 EEA1Q15075 1411 aa25.57■■□□□ 1.68
CLCN2-204ENST00000434054 APLP2Q06481 763 aa25.54■■□□□ 1.68
CLCN2-204ENST00000434054 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
CLCN2-204ENST00000434054 CUX1P39880 1505 aa25.52■■□□□ 1.68
CLCN2-204ENST00000434054 CLIP1P30622 1438 aa25.51■■□□□ 1.67
CLCN2-204ENST00000434054 TOP2BQ02880 1626 aa25.45■■□□□ 1.67
CLCN2-204ENST00000434054 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
CLCN2-204ENST00000434054 MYT1Q01538 1121 aa25.36■■□□□ 1.65
CLCN2-204ENST00000434054 VPS8Q8N3P4 1428 aa25.36■■□□□ 1.65
CLCN2-204ENST00000434054 RAPGEF2Q9Y4G8 1499 aa25.35■■□□□ 1.65
CLCN2-204ENST00000434054 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
CLCN2-204ENST00000434054 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
CLCN2-204ENST00000434054 LAMC3Q9Y6N6 1575 aa25.31■■□□□ 1.64
CLCN2-204ENST00000434054 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
CLCN2-204ENST00000434054 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
CLCN2-204ENST00000434054 KANK4Q5T7N3 995 aaPredicted RBP25.23■■□□□ 1.63
CLCN2-204ENST00000434054 CUX2O14529 1486 aa25.22■■□□□ 1.63
CLCN2-204ENST00000434054 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
CLCN2-204ENST00000434054 KIF21BO75037 1637 aa25.21■■□□□ 1.63
CLCN2-204ENST00000434054 ITGAEP38570 1179 aa25.2■■□□□ 1.62
CLCN2-204ENST00000434054 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
CLCN2-204ENST00000434054 KIF27Q86VH2 1401 aa25.19■■□□□ 1.62
CLCN2-204ENST00000434054 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
CLCN2-204ENST00000434054 SUPT16HQ9Y5B9 1047 aaKnown RBP25.18■■□□□ 1.62
CLCN2-204ENST00000434054 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
CLCN2-204ENST00000434054 KIF21AQ7Z4S6 1674 aa25.15■■□□□ 1.62
CLCN2-204ENST00000434054 DNMBPQ6XZF7 1577 aa25.12■■□□□ 1.61
CLCN2-204ENST00000434054 POLA1P09884 1462 aaPredicted RBP25.12■■□□□ 1.61
CLCN2-204ENST00000434054 KCNH8Q96L42 1107 aa25.09■■□□□ 1.61
CLCN2-204ENST00000434054 ERCC6Q03468 1493 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms