RNA–Protein interactions for RNA: ENST00000422031.6

OTUB1-202, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene OTUB1, Length 2,297 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-202ENST00000422031 NISCHQ9Y2I1 1504 aa37.62■■■■□ 3.61
OTUB1-202ENST00000422031 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
OTUB1-202ENST00000422031 ABCC9O60706 1549 aa31.76■■■□□ 2.68
OTUB1-202ENST00000422031 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
OTUB1-202ENST00000422031 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
OTUB1-202ENST00000422031 DCAF1Q9Y4B6 1507 aa31.08■■■□□ 2.57
OTUB1-202ENST00000422031 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
OTUB1-202ENST00000422031 NACADO15069 1562 aa30.9■■■□□ 2.54
OTUB1-202ENST00000422031 RB1CC1Q8TDY2 1594 aa30.76■■■□□ 2.52
OTUB1-202ENST00000422031 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
OTUB1-202ENST00000422031 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
OTUB1-202ENST00000422031 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
OTUB1-202ENST00000422031 BICRAQ9NZM4 1560 aa29.9■■■□□ 2.38
OTUB1-202ENST00000422031 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.378e-7■■■■□ 25.6
OTUB1-202ENST00000422031 CECR2Q9BXF3 1484 aa29.3■■■□□ 2.28
OTUB1-202ENST00000422031 BAZ1AQ9NRL2 1556 aaPredicted RBP29.08■■■□□ 2.25
OTUB1-202ENST00000422031 MROH2BQ7Z745 1585 aa29.07■■■□□ 2.24
OTUB1-202ENST00000422031 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
OTUB1-202ENST00000422031 EIF4G1Q04637 1599 aaKnown RBP29.02■■■□□ 2.24
OTUB1-202ENST00000422031 RSF1Q96T23 1441 aaPredicted RBP28.98■■■□□ 2.23
OTUB1-202ENST00000422031 SUPT5HO00267 1087 aaKnown RBP28.88■■■□□ 2.21
OTUB1-202ENST00000422031 WIZO95785 1651 aa28.82■■■□□ 2.2
OTUB1-202ENST00000422031 CC2D2AQ9P2K1 1620 aa28.74■■■□□ 2.19
OTUB1-202ENST00000422031 PEG3Q9GZU2 1588 aa28.7■■■□□ 2.19
OTUB1-202ENST00000422031 ATAD2BQ9ULI0 1458 aa28.69■■■□□ 2.18
OTUB1-202ENST00000422031 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
OTUB1-202ENST00000422031 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
OTUB1-202ENST00000422031 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
OTUB1-202ENST00000422031 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
OTUB1-202ENST00000422031 TOP2AP11388 1531 aaKnown RBP28.46■■■□□ 2.15
OTUB1-202ENST00000422031 HMGXB3Q12766 1538 aa28.44■■■□□ 2.14
OTUB1-202ENST00000422031 CCDC88BA6NC98 1476 aa28.17■■■□□ 2.1
OTUB1-202ENST00000422031 HRCP23327 699 aa27.99■■■□□ 2.07
OTUB1-202ENST00000422031 CFTRP13569 1480 aa27.75■■■□□ 2.03
OTUB1-202ENST00000422031 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
OTUB1-202ENST00000422031 NESP48681 1621 aa27.74■■■□□ 2.03
OTUB1-202ENST00000422031 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
OTUB1-202ENST00000422031 PRDM2Q13029 1718 aa27.6■■■□□ 2.01
OTUB1-202ENST00000422031 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
OTUB1-202ENST00000422031 ABCC8Q09428 1581 aa27.44■■□□□ 1.98
OTUB1-202ENST00000422031 PCGF6Q9BYE7 350 aa27.43■■□□□ 1.98
OTUB1-202ENST00000422031 PDS5BQ9NTI5 1447 aa27.42■■□□□ 1.98
OTUB1-202ENST00000422031 KIF21AQ7Z4S6 1674 aa27.41■■□□□ 1.98
OTUB1-202ENST00000422031 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
OTUB1-202ENST00000422031 CEP164Q9UPV0 1460 aa27.33■■□□□ 1.97
OTUB1-202ENST00000422031 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
OTUB1-202ENST00000422031 ERCC6Q03468 1493 aa27.26■■□□□ 1.95
OTUB1-202ENST00000422031 SYNJ1O43426 1573 aa27.23■■□□□ 1.95
OTUB1-202ENST00000422031 CUX1P39880 1505 aa27.21■■□□□ 1.95
OTUB1-202ENST00000422031 PPARGC1BQ86YN6 1023 aaKnown RBP27.18■■□□□ 1.94
OTUB1-202ENST00000422031 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
OTUB1-202ENST00000422031 TRIM41Q8WV44 630 aa27.16■■□□□ 1.94
OTUB1-202ENST00000422031 TOP2BQ02880 1626 aa27.14■■□□□ 1.93
OTUB1-202ENST00000422031 MRC2Q9UBG0 1479 aa27.12■■□□□ 1.93
OTUB1-202ENST00000422031 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
OTUB1-202ENST00000422031 DNMBPQ6XZF7 1577 aa27.11■■□□□ 1.93
OTUB1-202ENST00000422031 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
OTUB1-202ENST00000422031 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
OTUB1-202ENST00000422031 WDR62O43379 1518 aa27.02■■□□□ 1.92
OTUB1-202ENST00000422031 FGD5Q6ZNL6 1462 aa26.98■■□□□ 1.91
OTUB1-202ENST00000422031 PELP1Q8IZL8 1130 aaKnown RBP26.97■■□□□ 1.91
OTUB1-202ENST00000422031 POLA1P09884 1462 aaPredicted RBP26.95■■□□□ 1.9
OTUB1-202ENST00000422031 RAD54L2Q9Y4B4 1467 aa26.86■■□□□ 1.89
OTUB1-202ENST00000422031 CUX2O14529 1486 aa26.83■■□□□ 1.89
OTUB1-202ENST00000422031 SOGA1O94964 1423 aa26.82■■□□□ 1.88
OTUB1-202ENST00000422031 TRIM26Q12899 539 aaPredicted RBP26.77■■□□□ 1.88
OTUB1-202ENST00000422031 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
OTUB1-202ENST00000422031 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
OTUB1-202ENST00000422031 WDR97A6NE52 1622 aa26.73■■□□□ 1.87
OTUB1-202ENST00000422031 ABCA10Q8WWZ4 1543 aa26.72■■□□□ 1.87
OTUB1-202ENST00000422031 IFT140Q96RY7 1462 aa26.7■■□□□ 1.86
OTUB1-202ENST00000422031 FAM9AQ8IZU1 332 aaPredicted RBP26.69■■□□□ 1.86
OTUB1-202ENST00000422031 ZEB1P37275 1124 aaPredicted RBP26.64■■□□□ 1.86
OTUB1-202ENST00000422031 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
OTUB1-202ENST00000422031 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
OTUB1-202ENST00000422031 LOC105371045A0A1W2PR82 267 aa26.62■■□□□ 1.85
OTUB1-202ENST00000422031 KIF27Q86VH2 1401 aa26.62■■□□□ 1.85
OTUB1-202ENST00000422031 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
OTUB1-202ENST00000422031 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.843e-10■■■■■ 44.3
OTUB1-202ENST00000422031 EEA1Q15075 1411 aa26.54■■□□□ 1.84
OTUB1-202ENST00000422031 GAPVD1Q14C86 1478 aa26.52■■□□□ 1.84
OTUB1-202ENST00000422031 EIF4G3O43432 1585 aaKnown RBP26.52■■□□□ 1.84
OTUB1-202ENST00000422031 CSRNP3Q8WYN3 585 aa26.48■■□□□ 1.83
OTUB1-202ENST00000422031 IGF1RP08069 1367 aa26.46■■□□□ 1.83
OTUB1-202ENST00000422031 PBRM1Q86U86 1689 aa26.45■■□□□ 1.82
OTUB1-202ENST00000422031 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.82
OTUB1-202ENST00000422031 GRIN2BQ13224 1484 aa26.39■■□□□ 1.81
OTUB1-202ENST00000422031 EHMT2Q96KQ7 1210 aa26.36■■□□□ 1.81
OTUB1-202ENST00000422031 PRXQ9BXM0 1461 aa26.32■■□□□ 1.8
OTUB1-202ENST00000422031 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
OTUB1-202ENST00000422031 CARMIL1Q5VZK9 1371 aa26.3■■□□□ 1.8
OTUB1-202ENST00000422031 CUL7Q14999 1698 aa26.3■■□□□ 1.8
OTUB1-202ENST00000422031 KIF21BO75037 1637 aa26.28■■□□□ 1.8
OTUB1-202ENST00000422031 RAPGEF2Q9Y4G8 1499 aa26.27■■□□□ 1.8
OTUB1-202ENST00000422031 ADAMTS12P58397 1594 aa26.26■■□□□ 1.79
OTUB1-202ENST00000422031 SCAF1Q9H7N4 1312 aaKnown RBP26.25■■□□□ 1.79
OTUB1-202ENST00000422031 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
OTUB1-202ENST00000422031 FHAD1B1AJZ9 1412 aa26.21■■□□□ 1.79
OTUB1-202ENST00000422031 GOLGA3Q08378 1498 aa26.19■■□□□ 1.78
OTUB1-202ENST00000422031 SYNJ2O15056 1496 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms