RNA–Protein interactions for RNA: ENST00000356891.3

C12orf29-201, Transcript of chromosome 12 open reading frame 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf29, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf29-201ENST00000356891 NISCHQ9Y2I1 1504 aa31.52■■■□□ 2.64
C12orf29-201ENST00000356891 SHROOM4Q9ULL8 1493 aa28.64■■■□□ 2.18
C12orf29-201ENST00000356891 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.15
C12orf29-201ENST00000356891 HRCP23327 699 aa28.19■■■□□ 2.1
C12orf29-201ENST00000356891 PPARGC1BQ86YN6 1023 aaKnown RBP28.12■■■□□ 2.09
C12orf29-201ENST00000356891 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
C12orf29-201ENST00000356891 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
C12orf29-201ENST00000356891 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
C12orf29-201ENST00000356891 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
C12orf29-201ENST00000356891 DCAF8L2P0C7V8 631 aa27.18■■□□□ 1.94
C12orf29-201ENST00000356891 SCAF1Q9H7N4 1312 aaKnown RBP26.8■■□□□ 1.88
C12orf29-201ENST00000356891 TRIM26Q12899 539 aaPredicted RBP26.78■■□□□ 1.88
C12orf29-201ENST00000356891 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
C12orf29-201ENST00000356891 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
C12orf29-201ENST00000356891 EHMT2Q96KQ7 1210 aa26.66■■□□□ 1.86
C12orf29-201ENST00000356891 PELP1Q8IZL8 1130 aaKnown RBP26.57■■□□□ 1.84
C12orf29-201ENST00000356891 FAM9AQ8IZU1 332 aaPredicted RBP26.45■■□□□ 1.83
C12orf29-201ENST00000356891 CCDC180Q9P1Z9 1646 aa26.34■■□□□ 1.81
C12orf29-201ENST00000356891 ZEB1P37275 1124 aaPredicted RBP26.28■■□□□ 1.8
C12orf29-201ENST00000356891 NEUROD1Q13562 356 aa26.15■■□□□ 1.78
C12orf29-201ENST00000356891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.05■■□□□ 1.76
C12orf29-201ENST00000356891 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
C12orf29-201ENST00000356891 ACIN1Q9UKV3 1341 aaKnown RBP26.01■■□□□ 1.75
C12orf29-201ENST00000356891 GTF3C3Q9Y5Q9 886 aa25.99■■□□□ 1.75
C12orf29-201ENST00000356891 TTBK1Q5TCY1 1321 aaPredicted RBP25.92■■□□□ 1.74
C12orf29-201ENST00000356891 CCER1Q8TC90 406 aaPredicted RBP25.85■■□□□ 1.73
C12orf29-201ENST00000356891 DIEXFQ68CQ4 756 aaKnown RBP25.73■■□□□ 1.71
C12orf29-201ENST00000356891 YTHDC1Q96MU7 727 aaKnown RBP25.68■■□□□ 1.7
C12orf29-201ENST00000356891 CENPBP07199 599 aaPredicted RBP25.6■■□□□ 1.69
C12orf29-201ENST00000356891 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
C12orf29-201ENST00000356891 RB1CC1Q8TDY2 1594 aa25.45■■□□□ 1.66
C12orf29-201ENST00000356891 ABCC9O60706 1549 aa25.36■■□□□ 1.65
C12orf29-201ENST00000356891 MYT1Q01538 1121 aa25.3■■□□□ 1.64
C12orf29-201ENST00000356891 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
C12orf29-201ENST00000356891 MIER1Q8N108 512 aa25.19■■□□□ 1.62
C12orf29-201ENST00000356891 ZNF316A6NFI3 1004 aaPredicted RBP25.16■■□□□ 1.62
C12orf29-201ENST00000356891 HNRNPUL2Q1KMD3 747 aaKnown RBP25■■□□□ 1.59
C12orf29-201ENST00000356891 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
C12orf29-201ENST00000356891 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
C12orf29-201ENST00000356891 MROH2BQ7Z745 1585 aa24.82■■□□□ 1.56
C12orf29-201ENST00000356891 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
C12orf29-201ENST00000356891 WIZO95785 1651 aa24.75■■□□□ 1.55
C12orf29-201ENST00000356891 RANGAP1P46060 587 aaPredicted RBP24.74■■□□□ 1.55
C12orf29-201ENST00000356891 ABCC8Q09428 1581 aa24.72■■□□□ 1.55
C12orf29-201ENST00000356891 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
C12orf29-201ENST00000356891 SOGA1O94964 1423 aa24.69■■□□□ 1.54
C12orf29-201ENST00000356891 SUPT16HQ9Y5B9 1047 aaKnown RBP24.65■■□□□ 1.54
C12orf29-201ENST00000356891 RUSC2Q8N2Y8 1516 aa24.6■■□□□ 1.53
C12orf29-201ENST00000356891 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
C12orf29-201ENST00000356891 BCANQ96GW7 911 aa24.54■■□□□ 1.52
C12orf29-201ENST00000356891 TSHZ2Q9NRE2 1034 aa24.52■■□□□ 1.52
C12orf29-201ENST00000356891 CSRNP3Q8WYN3 585 aa24.51■■□□□ 1.51
C12orf29-201ENST00000356891 TNIKQ9UKE5 1360 aa24.47■■□□□ 1.51
C12orf29-201ENST00000356891 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
C12orf29-201ENST00000356891 ANP32EQ9BTT0 268 aa24.38■■□□□ 1.49
C12orf29-201ENST00000356891 BCL11AQ9H165 835 aa24.37■■□□□ 1.49
C12orf29-201ENST00000356891 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
C12orf29-201ENST00000356891 APLP2Q06481 763 aa24.28■■□□□ 1.48
C12orf29-201ENST00000356891 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
C12orf29-201ENST00000356891 NACADO15069 1562 aa24.19■■□□□ 1.46
C12orf29-201ENST00000356891 GOLGA3Q08378 1498 aa24.18■■□□□ 1.46
C12orf29-201ENST00000356891 ITGAEP38570 1179 aa24.17■■□□□ 1.46
C12orf29-201ENST00000356891 FKBP8Q14318 412 aa24.16■■□□□ 1.46
C12orf29-201ENST00000356891 CLIP1P30622 1438 aa24.15■■□□□ 1.46
C12orf29-201ENST00000356891 DHX57Q6P158 1386 aaKnown RBP24.09■■□□□ 1.45
C12orf29-201ENST00000356891 SMARCA2P51531 1590 aa24.04■■□□□ 1.44
C12orf29-201ENST00000356891 KANK4Q5T7N3 995 aaPredicted RBP24.01■■□□□ 1.43
C12orf29-201ENST00000356891 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
C12orf29-201ENST00000356891 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
C12orf29-201ENST00000356891 VPS8Q8N3P4 1428 aa23.99■■□□□ 1.43
C12orf29-201ENST00000356891 CLSPNQ9HAW4 1339 aa23.98■■□□□ 1.43
C12orf29-201ENST00000356891 EEA1Q15075 1411 aa23.97■■□□□ 1.43
C12orf29-201ENST00000356891 DDX10Q13206 875 aaKnown RBP23.97■■□□□ 1.43
C12orf29-201ENST00000356891 TRIM52Q96A61 297 aa23.95■■□□□ 1.42
C12orf29-201ENST00000356891 RBM19Q9Y4C8 960 aaKnown RBP23.95■■□□□ 1.42
C12orf29-201ENST00000356891 RAPGEF2Q9Y4G8 1499 aa23.92■■□□□ 1.42
C12orf29-201ENST00000356891 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
C12orf29-201ENST00000356891 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.4
C12orf29-201ENST00000356891 MSH5O43196 834 aa23.81■■□□□ 1.4
C12orf29-201ENST00000356891 IRX6P78412 446 aaPredicted RBP23.8■■□□□ 1.4
C12orf29-201ENST00000356891 KIF21BO75037 1637 aa23.8■■□□□ 1.4
C12orf29-201ENST00000356891 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
C12orf29-201ENST00000356891 SIN3AQ96ST3 1273 aa23.79■■□□□ 1.4
C12orf29-201ENST00000356891 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
C12orf29-201ENST00000356891 NEFLP07196 543 aa23.77■■□□□ 1.39
C12orf29-201ENST00000356891 UNC13AQ9UPW8 1703 aa23.64■■□□□ 1.37
C12orf29-201ENST00000356891 RAB3GAP2Q9H2M9 1393 aa23.58■■□□□ 1.37
C12orf29-201ENST00000356891 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
C12orf29-201ENST00000356891 CCNB3Q8WWL7 1395 aa23.54■■□□□ 1.36
C12orf29-201ENST00000356891 ERICH6Q7L0X2 663 aa23.53■■□□□ 1.36
C12orf29-201ENST00000356891 PPP1R15AO75807 674 aaPredicted RBP23.53■■□□□ 1.36
C12orf29-201ENST00000356891 WDR97A6NE52 1622 aa23.52■■□□□ 1.36
C12orf29-201ENST00000356891 FAM50AQ14320 339 aaKnown RBP23.51■■□□□ 1.35
C12orf29-201ENST00000356891 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
C12orf29-201ENST00000356891 ANP32CO43423 234 aa23.49■■□□□ 1.35
C12orf29-201ENST00000356891 ATP1B4Q9UN42 357 aaPredicted RBP23.46■■□□□ 1.35
C12orf29-201ENST00000356891 MAPKBP1O60336 1514 aa23.46■■□□□ 1.35
C12orf29-201ENST00000356891 RRBP1Q9P2E9 1410 aaKnown RBP23.46■■□□□ 1.35
C12orf29-201ENST00000356891 HNRNPUQ00839 825 aaKnown RBP eCLIP23.43■■□□□ 1.34
C12orf29-201ENST00000356891 BICRAQ9NZM4 1560 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms