Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 SNORA78-201ENST00000459373 127 ntBASIC20.32■□□□□ 0.84
PABPC1P11940 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.32■□□□□ 0.84
PABPC1P11940 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.32■□□□□ 0.84
PABPC1P11940 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.32■□□□□ 0.84
PABPC1P11940 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 KRT16P6-202ENST00000425692 1426 ntBASIC20.32■□□□□ 0.84
PABPC1P11940 AL135905.2-201ENST00000584934 1404 ntBASIC20.32■□□□□ 0.84
PABPC1P11940 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
PABPC1P11940 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
PABPC1P11940 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PABPC1P11940 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
PABPC1P11940 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
PABPC1P11940 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PABPC1P11940 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.31■□□□□ 0.84
PABPC1P11940 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PABPC1P11940 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PABPC1P11940 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PABPC1P11940 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PABPC1P11940 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PABPC1P11940 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PABPC1P11940 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PABPC1P11940 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.31■□□□□ 0.84
PABPC1P11940 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PABPC1P11940 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PABPC1P11940 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.31■□□□□ 0.84
PABPC1P11940 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PABPC1P11940 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.31■□□□□ 0.84
PABPC1P11940 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.31■□□□□ 0.84
PABPC1P11940 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PABPC1P11940 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PABPC1P11940 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.31■□□□□ 0.84
PABPC1P11940 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.31■□□□□ 0.84
PABPC1P11940 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.31■□□□□ 0.84
PABPC1P11940 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PABPC1P11940 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PABPC1P11940 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.31■□□□□ 0.84
PABPC1P11940 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PABPC1P11940 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.31■□□□□ 0.84
PABPC1P11940 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.3■□□□□ 0.84
PABPC1P11940 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.3■□□□□ 0.84
PABPC1P11940 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 KRT16P5-201ENST00000455284 522 ntBASIC20.3■□□□□ 0.84
PABPC1P11940 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.3■□□□□ 0.84
PABPC1P11940 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PABPC1P11940 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PABPC1P11940 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
PABPC1P11940 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PABPC1P11940 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PABPC1P11940 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PABPC1P11940 SMG8-203ENST00000578922 2178 ntBASIC20.29■□□□□ 0.84
PABPC1P11940 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PABPC1P11940 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.29■□□□□ 0.84
PABPC1P11940 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PABPC1P11940 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PABPC1P11940 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.29■□□□□ 0.84
PABPC1P11940 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.29■□□□□ 0.84
PABPC1P11940 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PABPC1P11940 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 AP001412.1-201ENST00000608405 714 ntBASIC20.29■□□□□ 0.84
PABPC1P11940 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 AL049637.2-201ENST00000641778 930 ntBASIC20.29■□□□□ 0.84
PABPC1P11940 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PABPC1P11940 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.29■□□□□ 0.84
PABPC1P11940 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PABPC1P11940 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PABPC1P11940 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.28■□□□□ 0.84
PABPC1P11940 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.28■□□□□ 0.84
PABPC1P11940 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.28■□□□□ 0.84
PABPC1P11940 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms