RNA–Protein interactions for RNA: ENST00000370232.3

TREX2-206, Transcript of three prime repair exonuclease 2, humanhuman

TSL 1 (best) BASIC

Gene TREX2, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2-206ENST00000370232 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
TREX2-206ENST00000370232 CCDC180Q9P1Z9 1646 aa40.61■■■■■ 4.09
TREX2-206ENST00000370232 ABCC9O60706 1549 aa38.87■■■■□ 3.81
TREX2-206ENST00000370232 ZCCHC6Q5VYS8 1495 aaKnown RBP38.8■■■■□ 3.8
TREX2-206ENST00000370232 DCAF8L2P0C7V8 631 aa38.41■■■■□ 3.74
TREX2-206ENST00000370232 DCAF1Q9Y4B6 1507 aa38.25■■■■□ 3.71
TREX2-206ENST00000370232 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
TREX2-206ENST00000370232 NACADO15069 1562 aa37.92■■■■□ 3.66
TREX2-206ENST00000370232 RB1CC1Q8TDY2 1594 aa37.72■■■■□ 3.63
TREX2-206ENST00000370232 SHROOM4Q9ULL8 1493 aa37.47■■■■□ 3.59
TREX2-206ENST00000370232 SCRIBQ14160 1630 aa37.32■■■■□ 3.56
TREX2-206ENST00000370232 UNC13AQ9UPW8 1703 aa36.99■■■■□ 3.51
TREX2-206ENST00000370232 BICRAQ9NZM4 1560 aa36.61■■■■□ 3.45
TREX2-206ENST00000370232 PABPN1Q86U42 306 aaKnown RBP eCLIP36.55■■■■□ 3.44
TREX2-206ENST00000370232 CECR2Q9BXF3 1484 aa36.04■■■■□ 3.36
TREX2-206ENST00000370232 BAZ1AQ9NRL2 1556 aaPredicted RBP35.79■■■■□ 3.32
TREX2-206ENST00000370232 SUPT5HO00267 1087 aaKnown RBP35.77■■■■□ 3.32
TREX2-206ENST00000370232 MROH2BQ7Z745 1585 aa35.77■■■■□ 3.32
TREX2-206ENST00000370232 RSF1Q96T23 1441 aaPredicted RBP35.73■■■■□ 3.31
TREX2-206ENST00000370232 SMARCA4P51532 1647 aa35.71■■■■□ 3.31
TREX2-206ENST00000370232 EIF4G1Q04637 1599 aaKnown RBP35.56■■■■□ 3.28
TREX2-206ENST00000370232 WIZO95785 1651 aa35.47■■■■□ 3.27
TREX2-206ENST00000370232 PEG3Q9GZU2 1588 aa35.27■■■■□ 3.24
TREX2-206ENST00000370232 ATAD2BQ9ULI0 1458 aa35.23■■■■□ 3.23
TREX2-206ENST00000370232 SMARCA2P51531 1590 aa35.19■■■■□ 3.22
TREX2-206ENST00000370232 CC2D2AQ9P2K1 1620 aa35.15■■■■□ 3.22
TREX2-206ENST00000370232 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
TREX2-206ENST00000370232 BAZ1BQ9UIG0 1483 aaKnown RBP35.02■■■■□ 3.2
TREX2-206ENST00000370232 NCAPD3P42695 1498 aa34.99■■■■□ 3.19
TREX2-206ENST00000370232 HMGXB3Q12766 1538 aa34.92■■■■□ 3.18
TREX2-206ENST00000370232 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
TREX2-206ENST00000370232 CCDC88BA6NC98 1476 aa34.69■■■■□ 3.14
TREX2-206ENST00000370232 CFTRP13569 1480 aa34.09■■■■□ 3.05
TREX2-206ENST00000370232 CADPSQ9ULU8 1353 aa34.07■■■■□ 3.04
TREX2-206ENST00000370232 NESP48681 1621 aa33.98■■■■□ 3.03
TREX2-206ENST00000370232 CHIC1Q5VXU3 224 aa33.96■■■■□ 3.03
TREX2-206ENST00000370232 PRDM2Q13029 1718 aa33.92■■■■□ 3.02
TREX2-206ENST00000370232 LAMC3Q9Y6N6 1575 aa33.9■■■■□ 3.02
TREX2-206ENST00000370232 ABCC8Q09428 1581 aa33.84■■■■□ 3.01
TREX2-206ENST00000370232 FANCD2Q9BXW9 1451 aa33.71■■■□□ 2.99
TREX2-206ENST00000370232 TRIM41Q8WV44 630 aa33.65■■■□□ 2.98
TREX2-206ENST00000370232 WRNQ14191 1432 aaPredicted RBP eCLIP33.65■■■□□ 2.98
TREX2-206ENST00000370232 PDS5BQ9NTI5 1447 aa33.64■■■□□ 2.98
TREX2-206ENST00000370232 KIF21AQ7Z4S6 1674 aa33.57■■■□□ 2.96
TREX2-206ENST00000370232 SYNJ1O43426 1573 aa33.56■■■□□ 2.96
TREX2-206ENST00000370232 CEP164Q9UPV0 1460 aa33.55■■■□□ 2.96
TREX2-206ENST00000370232 CUX1P39880 1505 aa33.47■■■□□ 2.95
TREX2-206ENST00000370232 TOP2BQ02880 1626 aa33.44■■■□□ 2.94
TREX2-206ENST00000370232 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
TREX2-206ENST00000370232 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
TREX2-206ENST00000370232 URB2Q14146 1524 aaKnown RBP33.33■■■□□ 2.93
TREX2-206ENST00000370232 DNMBPQ6XZF7 1577 aa33.33■■■□□ 2.93
TREX2-206ENST00000370232 TOPBP1Q92547 1522 aa33.3■■■□□ 2.92
TREX2-206ENST00000370232 MRC2Q9UBG0 1479 aa33.26■■■□□ 2.91
TREX2-206ENST00000370232 FGD5Q6ZNL6 1462 aa33.19■■■□□ 2.9
TREX2-206ENST00000370232 THOC2Q8NI27 1593 aaKnown RBP33.14■■■□□ 2.9
TREX2-206ENST00000370232 WDR62O43379 1518 aa33.11■■■□□ 2.89
TREX2-206ENST00000370232 POLA1P09884 1462 aaPredicted RBP33.1■■■□□ 2.89
TREX2-206ENST00000370232 SOGA1O94964 1423 aa33.09■■■□□ 2.89
TREX2-206ENST00000370232 FAM9AQ8IZU1 332 aaPredicted RBP33.05■■■□□ 2.88
TREX2-206ENST00000370232 RAD54L2Q9Y4B4 1467 aa33■■■□□ 2.87
TREX2-206ENST00000370232 RUSC2Q8N2Y8 1516 aa33■■■□□ 2.87
TREX2-206ENST00000370232 CUX2O14529 1486 aa32.89■■■□□ 2.86
TREX2-206ENST00000370232 ABCA10Q8WWZ4 1543 aa32.87■■■□□ 2.85
TREX2-206ENST00000370232 EEA1Q15075 1411 aa32.86■■■□□ 2.85
TREX2-206ENST00000370232 TARBP1Q13395 1621 aaKnown RBP32.84■■■□□ 2.85
TREX2-206ENST00000370232 WDR97A6NE52 1622 aa32.83■■■□□ 2.85
TREX2-206ENST00000370232 KIF27Q86VH2 1401 aa32.82■■■□□ 2.85
TREX2-206ENST00000370232 IFT140Q96RY7 1462 aa32.76■■■□□ 2.84
TREX2-206ENST00000370232 CSRNP3Q8WYN3 585 aa32.75■■■□□ 2.83
TREX2-206ENST00000370232 TDRD9Q8NDG6 1382 aaKnown RBP32.71■■■□□ 2.83
TREX2-206ENST00000370232 LOC105371045A0A1W2PR82 267 aa32.67■■■□□ 2.82
TREX2-206ENST00000370232 ABCA5Q8WWZ7 1642 aa32.66■■■□□ 2.82
TREX2-206ENST00000370232 EHMT2Q96KQ7 1210 aa32.65■■■□□ 2.82
TREX2-206ENST00000370232 ZNF608Q9ULD9 1512 aaPredicted RBP32.64■■■□□ 2.82
TREX2-206ENST00000370232 GAPVD1Q14C86 1478 aa32.61■■■□□ 2.81
TREX2-206ENST00000370232 AQRO60306 1485 aaKnown RBP eCLIP32.59■■■□□ 2.811e-6■■■■□ 21.8
TREX2-206ENST00000370232 IGF1RP08069 1367 aa32.59■■■□□ 2.81
TREX2-206ENST00000370232 EIF4G3O43432 1585 aaKnown RBP32.53■■■□□ 2.8
TREX2-206ENST00000370232 KIF21BO75037 1637 aa32.5■■■□□ 2.79
TREX2-206ENST00000370232 PBRM1Q86U86 1689 aa32.49■■■□□ 2.79
TREX2-206ENST00000370232 PRXQ9BXM0 1461 aa32.49■■■□□ 2.79
TREX2-206ENST00000370232 ERICH3Q5RHP9 1530 aa32.47■■■□□ 2.79
TREX2-206ENST00000370232 GOLGA3Q08378 1498 aa32.43■■■□□ 2.78
TREX2-206ENST00000370232 RAPGEF2Q9Y4G8 1499 aa32.43■■■□□ 2.78
TREX2-206ENST00000370232 GRIN2BQ13224 1484 aa32.42■■■□□ 2.78
TREX2-206ENST00000370232 CARMIL1Q5VZK9 1371 aa32.42■■■□□ 2.78
TREX2-206ENST00000370232 CUL7Q14999 1698 aa32.4■■■□□ 2.78
TREX2-206ENST00000370232 UBTFP17480 764 aaKnown RBP32.31■■■□□ 2.76
TREX2-206ENST00000370232 SNAPC4Q5SXM2 1469 aa32.29■■■□□ 2.76
TREX2-206ENST00000370232 ADAMTS12P58397 1594 aa32.28■■■□□ 2.76
TREX2-206ENST00000370232 FHAD1B1AJZ9 1412 aa32.23■■■□□ 2.75
TREX2-206ENST00000370232 TNIKQ9UKE5 1360 aa32.21■■■□□ 2.75
TREX2-206ENST00000370232 MAGI1Q96QZ7 1491 aaPredicted RBP32.2■■■□□ 2.75
TREX2-206ENST00000370232 SYNJ2O15056 1496 aa32.09■■■□□ 2.73
TREX2-206ENST00000370232 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
TREX2-206ENST00000370232 CHMP7Q8WUX9 453 aaPredicted RBP32.03■■■□□ 2.72
TREX2-206ENST00000370232 FBLN2P98095 1184 aa32.03■■■□□ 2.72
TREX2-206ENST00000370232 CEP162Q5TB80 1403 aa32.03■■■□□ 2.72
TREX2-206ENST00000370232 CTTNBP2Q8WZ74 1663 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms