Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 NOC2LP2-201ENST00000407594 1944 ntBASIC13.95□□□□□ -0.18
VPS25Q9BRG1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VPS25Q9BRG1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 AC097358.2-201ENST00000607541 1159 ntBASIC13.94□□□□□ -0.18
VPS25Q9BRG1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
VPS25Q9BRG1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS25Q9BRG1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 AL359258.2-201ENST00000564063 1566 ntBASIC13.92□□□□□ -0.18
VPS25Q9BRG1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 AC068880.1-201ENST00000507289 2297 ntBASIC13.92□□□□□ -0.18
VPS25Q9BRG1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 AL138781.2-201ENST00000617896 1843 ntBASIC13.92□□□□□ -0.18
VPS25Q9BRG1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 AC103702.1-201ENST00000548801 2630 ntBASIC13.92□□□□□ -0.18
VPS25Q9BRG1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VPS25Q9BRG1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS25Q9BRG1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS25Q9BRG1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS25Q9BRG1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS25Q9BRG1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VPS25Q9BRG1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS25Q9BRG1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS25Q9BRG1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms