RNA–Protein interactions for RNA: ENST00000378633.5

CDK11A-205, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best) BASIC

Gene CDK11A, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-205ENST00000378633 NISCHQ9Y2I1 1504 aa39.25■■■■□ 3.87
CDK11A-205ENST00000378633 CCDC180Q9P1Z9 1646 aa33.47■■■□□ 2.95
CDK11A-205ENST00000378633 ZCCHC6Q5VYS8 1495 aaKnown RBP33.2■■■□□ 2.91
CDK11A-205ENST00000378633 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
CDK11A-205ENST00000378633 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
CDK11A-205ENST00000378633 DCAF8L2P0C7V8 631 aa32.33■■■□□ 2.77
CDK11A-205ENST00000378633 DCAF1Q9Y4B6 1507 aa32.3■■■□□ 2.76
CDK11A-205ENST00000378633 CHIC1Q5VXU3 224 aa31.69■■■□□ 2.66
CDK11A-205ENST00000378633 MYO15BQ96JP2 1530 aa31.53■■■□□ 2.64
CDK11A-205ENST00000378633 ABCC9O60706 1549 aa31.31■■■□□ 2.6
CDK11A-205ENST00000378633 SCRIBQ14160 1630 aa31.22■■■□□ 2.59
CDK11A-205ENST00000378633 RSF1Q96T23 1441 aaPredicted RBP31■■■□□ 2.55
CDK11A-205ENST00000378633 NACADO15069 1562 aa30.94■■■□□ 2.54
CDK11A-205ENST00000378633 RB1CC1Q8TDY2 1594 aa30.68■■■□□ 2.5
CDK11A-205ENST00000378633 LOC105371045A0A1W2PR82 267 aa30.66■■■□□ 2.5
CDK11A-205ENST00000378633 HRCP23327 699 aa30.57■■■□□ 2.48
CDK11A-205ENST00000378633 CECR2Q9BXF3 1484 aa30.55■■■□□ 2.48
CDK11A-205ENST00000378633 PCGF6Q9BYE7 350 aa30.54■■■□□ 2.48
CDK11A-205ENST00000378633 MROH2BQ7Z745 1585 aa30.46■■■□□ 2.47
CDK11A-205ENST00000378633 TRIM41Q8WV44 630 aa30.37■■■□□ 2.45
CDK11A-205ENST00000378633 WIZO95785 1651 aa30.28■■■□□ 2.44
CDK11A-205ENST00000378633 BAZ1AQ9NRL2 1556 aaPredicted RBP30.16■■■□□ 2.42
CDK11A-205ENST00000378633 TRIM26Q12899 539 aaPredicted RBP30.08■■■□□ 2.41
CDK11A-205ENST00000378633 FAM9AQ8IZU1 332 aaPredicted RBP30.02■■■□□ 2.4
CDK11A-205ENST00000378633 UNC13AQ9UPW8 1703 aa29.94■■■□□ 2.38
CDK11A-205ENST00000378633 EIF4G1Q04637 1599 aaKnown RBP29.93■■■□□ 2.38
CDK11A-205ENST00000378633 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
CDK11A-205ENST00000378633 TOP2AP11388 1531 aaKnown RBP29.87■■■□□ 2.37
CDK11A-205ENST00000378633 PPARGC1BQ86YN6 1023 aaKnown RBP29.83■■■□□ 2.37
CDK11A-205ENST00000378633 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.35
CDK11A-205ENST00000378633 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
CDK11A-205ENST00000378633 EHMT2Q96KQ7 1210 aa29.68■■■□□ 2.34
CDK11A-205ENST00000378633 BICRAQ9NZM4 1560 aa29.59■■■□□ 2.33
CDK11A-205ENST00000378633 ABCC8Q09428 1581 aa29.55■■■□□ 2.32
CDK11A-205ENST00000378633 PABPN1Q86U42 306 aaKnown RBP eCLIP29.49■■■□□ 2.31
CDK11A-205ENST00000378633 ZEB1P37275 1124 aaPredicted RBP29.42■■■□□ 2.3
CDK11A-205ENST00000378633 PEG3Q9GZU2 1588 aa29.4■■■□□ 2.3
CDK11A-205ENST00000378633 SOGA1O94964 1423 aa29.26■■■□□ 2.28
CDK11A-205ENST00000378633 EEA1Q15075 1411 aa29.22■■■□□ 2.27
CDK11A-205ENST00000378633 ATAD2BQ9ULI0 1458 aa29.14■■■□□ 2.26
CDK11A-205ENST00000378633 WRNQ14191 1432 aaPredicted RBP eCLIP29.14■■■□□ 2.26
CDK11A-205ENST00000378633 TNIKQ9UKE5 1360 aa29.12■■■□□ 2.25
CDK11A-205ENST00000378633 CEP162Q5TB80 1403 aa29.12■■■□□ 2.25
CDK11A-205ENST00000378633 CSRNP3Q8WYN3 585 aa29.11■■■□□ 2.25
CDK11A-205ENST00000378633 RUSC2Q8N2Y8 1516 aa29.11■■■□□ 2.25
CDK11A-205ENST00000378633 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
CDK11A-205ENST00000378633 SYNJ1O43426 1573 aa28.97■■■□□ 2.23
CDK11A-205ENST00000378633 GOLGA3Q08378 1498 aa28.97■■■□□ 2.23
CDK11A-205ENST00000378633 UBTFP17480 764 aaKnown RBP28.92■■■□□ 2.22
CDK11A-205ENST00000378633 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
CDK11A-205ENST00000378633 KIF21BO75037 1637 aa28.81■■■□□ 2.2
CDK11A-205ENST00000378633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.81■■■□□ 2.2
CDK11A-205ENST00000378633 CCER1Q8TC90 406 aaPredicted RBP28.75■■■□□ 2.19
CDK11A-205ENST00000378633 TTBK1Q5TCY1 1321 aaPredicted RBP28.73■■■□□ 2.19
CDK11A-205ENST00000378633 TOP2BQ02880 1626 aa28.67■■■□□ 2.18
CDK11A-205ENST00000378633 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
CDK11A-205ENST00000378633 NCAPD3P42695 1498 aa28.62■■■□□ 2.17
CDK11A-205ENST00000378633 CLIP1P30622 1438 aa28.6■■■□□ 2.17
CDK11A-205ENST00000378633 BIVM-ERCC5R4GMW8 1640 aa28.58■■■□□ 2.17
CDK11A-205ENST00000378633 RAPGEF2Q9Y4G8 1499 aa28.57■■■□□ 2.16
CDK11A-205ENST00000378633 VPS8Q8N3P4 1428 aa28.49■■■□□ 2.15
CDK11A-205ENST00000378633 CUX1P39880 1505 aa28.38■■■□□ 2.13
CDK11A-205ENST00000378633 ERICH3Q5RHP9 1530 aa28.37■■■□□ 2.13
CDK11A-205ENST00000378633 PRXQ9BXM0 1461 aa28.37■■■□□ 2.13
CDK11A-205ENST00000378633 CFTRP13569 1480 aa28.36■■■□□ 2.13
CDK11A-205ENST00000378633 APLP2Q06481 763 aa28.28■■■□□ 2.12
CDK11A-205ENST00000378633 RANGAP1P46060 587 aaPredicted RBP28.25■■■□□ 2.11
CDK11A-205ENST00000378633 KIF27Q86VH2 1401 aa28.24■■■□□ 2.11
CDK11A-205ENST00000378633 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
CDK11A-205ENST00000378633 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
CDK11A-205ENST00000378633 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
CDK11A-205ENST00000378633 DIEXFQ68CQ4 756 aaKnown RBP28.15■■■□□ 2.1
CDK11A-205ENST00000378633 SCAF1Q9H7N4 1312 aaKnown RBP28.05■■■□□ 2.08
CDK11A-205ENST00000378633 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
CDK11A-205ENST00000378633 ZNF316A6NFI3 1004 aaPredicted RBP28■■■□□ 2.07
CDK11A-205ENST00000378633 CUX2O14529 1486 aa27.95■■■□□ 2.06
CDK11A-205ENST00000378633 KANK4Q5T7N3 995 aaPredicted RBP27.94■■■□□ 2.06
CDK11A-205ENST00000378633 ARHGAP35Q9NRY4 1499 aa27.94■■■□□ 2.06
CDK11A-205ENST00000378633 IGF1RP08069 1367 aa27.93■■■□□ 2.06
CDK11A-205ENST00000378633 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
CDK11A-205ENST00000378633 ACIN1Q9UKV3 1341 aaKnown RBP27.87■■■□□ 2.05
CDK11A-205ENST00000378633 FGD5Q6ZNL6 1462 aa27.87■■■□□ 2.05
CDK11A-205ENST00000378633 RRBP1Q9P2E9 1410 aaKnown RBP27.84■■■□□ 2.05
CDK11A-205ENST00000378633 NEUROD1Q13562 356 aa27.81■■■□□ 2.04
CDK11A-205ENST00000378633 CARMIL1Q5VZK9 1371 aa27.8■■■□□ 2.04
CDK11A-205ENST00000378633 CLSPNQ9HAW4 1339 aa27.77■■■□□ 2.04
CDK11A-205ENST00000378633 FANCD2Q9BXW9 1451 aa27.75■■■□□ 2.03
CDK11A-205ENST00000378633 DHX57Q6P158 1386 aaKnown RBP27.75■■■□□ 2.03
CDK11A-205ENST00000378633 CENPBP07199 599 aaPredicted RBP27.74■■■□□ 2.03
CDK11A-205ENST00000378633 CCNB3Q8WWL7 1395 aa27.69■■■□□ 2.02
CDK11A-205ENST00000378633 MAP3K1Q13233 1512 aa27.67■■■□□ 2.02
CDK11A-205ENST00000378633 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
CDK11A-205ENST00000378633 TIAM1Q13009 1591 aa27.64■■■□□ 2.01
CDK11A-205ENST00000378633 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
CDK11A-205ENST00000378633 TOPBP1Q92547 1522 aa27.57■■■□□ 2
CDK11A-205ENST00000378633 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
CDK11A-205ENST00000378633 POLA1P09884 1462 aaPredicted RBP27.56■■■□□ 2
CDK11A-205ENST00000378633 MIER1Q8N108 512 aa27.55■■■□□ 2
CDK11A-205ENST00000378633 FHAD1B1AJZ9 1412 aa27.54■■■□□ 2
CDK11A-205ENST00000378633 LRRC9Q6ZRR7 1453 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms