RNA–Protein interactions for RNA: ENST00000216879.8

NSFL1C-201, Transcript of NSFL1 cofactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSFL1C, Length 3,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-201ENST00000216879 NISCHQ9Y2I1 1504 aa30.53■■■□□ 2.48
NSFL1C-201ENST00000216879 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.11
NSFL1C-201ENST00000216879 SUPT5HO00267 1087 aaKnown RBP28.12■■■□□ 2.09
NSFL1C-201ENST00000216879 HRCP23327 699 aa27.76■■■□□ 2.03
NSFL1C-201ENST00000216879 PPARGC1BQ86YN6 1023 aaKnown RBP27.73■■■□□ 2.03
NSFL1C-201ENST00000216879 PCGF6Q9BYE7 350 aa27.73■■■□□ 2.03
NSFL1C-201ENST00000216879 MYO15BQ96JP2 1530 aa27.09■■□□□ 1.93
NSFL1C-201ENST00000216879 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
NSFL1C-201ENST00000216879 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
NSFL1C-201ENST00000216879 LOC105371045A0A1W2PR82 267 aa26.86■■□□□ 1.89
NSFL1C-201ENST00000216879 EHMT2Q96KQ7 1210 aa26.52■■□□□ 1.84
NSFL1C-201ENST00000216879 PELP1Q8IZL8 1130 aaKnown RBP26.42■■□□□ 1.82
NSFL1C-201ENST00000216879 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.82
NSFL1C-201ENST00000216879 TRIM26Q12899 539 aaPredicted RBP26.38■■□□□ 1.81
NSFL1C-201ENST00000216879 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
NSFL1C-201ENST00000216879 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
NSFL1C-201ENST00000216879 ZEB1P37275 1124 aaPredicted RBP25.98■■□□□ 1.75
NSFL1C-201ENST00000216879 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
NSFL1C-201ENST00000216879 NEUROD1Q13562 356 aa25.78■■□□□ 1.72
NSFL1C-201ENST00000216879 TTBK1Q5TCY1 1321 aaPredicted RBP25.78■■□□□ 1.72
NSFL1C-201ENST00000216879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.74■■□□□ 1.71
NSFL1C-201ENST00000216879 GTF3C3Q9Y5Q9 886 aa25.72■■□□□ 1.71
NSFL1C-201ENST00000216879 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
NSFL1C-201ENST00000216879 ACIN1Q9UKV3 1341 aaKnown RBP25.67■■□□□ 1.7
NSFL1C-201ENST00000216879 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
NSFL1C-201ENST00000216879 CCER1Q8TC90 406 aaPredicted RBP25.65■■□□□ 1.7
NSFL1C-201ENST00000216879 YTHDC1Q96MU7 727 aaKnown RBP25.56■■□□□ 1.68
NSFL1C-201ENST00000216879 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
NSFL1C-201ENST00000216879 DIEXFQ68CQ4 756 aaKnown RBP25.44■■□□□ 1.66
NSFL1C-201ENST00000216879 MYT1Q01538 1121 aa25.21■■□□□ 1.63
NSFL1C-201ENST00000216879 MIER1Q8N108 512 aa24.83■■□□□ 1.57
NSFL1C-201ENST00000216879 ZNF316A6NFI3 1004 aaPredicted RBP24.82■■□□□ 1.56
NSFL1C-201ENST00000216879 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
NSFL1C-201ENST00000216879 HNRNPUL2Q1KMD3 747 aaKnown RBP24.75■■□□□ 1.55
NSFL1C-201ENST00000216879 RB1CC1Q8TDY2 1594 aa24.69■■□□□ 1.54
NSFL1C-201ENST00000216879 UBTFP17480 764 aaKnown RBP24.6■■□□□ 1.53
NSFL1C-201ENST00000216879 RANGAP1P46060 587 aaPredicted RBP24.59■■□□□ 1.53
NSFL1C-201ENST00000216879 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
NSFL1C-201ENST00000216879 ABCC9O60706 1549 aa24.51■■□□□ 1.51
NSFL1C-201ENST00000216879 BCANQ96GW7 911 aa24.4■■□□□ 1.5
NSFL1C-201ENST00000216879 SUPT16HQ9Y5B9 1047 aaKnown RBP24.29■■□□□ 1.48
NSFL1C-201ENST00000216879 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
NSFL1C-201ENST00000216879 CEP162Q5TB80 1403 aa24.26■■□□□ 1.47
NSFL1C-201ENST00000216879 APLP2Q06481 763 aa24.17■■□□□ 1.46
NSFL1C-201ENST00000216879 BCL11AQ9H165 835 aa24.16■■□□□ 1.46
NSFL1C-201ENST00000216879 TSHZ2Q9NRE2 1034 aa24.16■■□□□ 1.46
NSFL1C-201ENST00000216879 ANP32EQ9BTT0 268 aa24.12■■□□□ 1.45
NSFL1C-201ENST00000216879 SOGA1O94964 1423 aa24.09■■□□□ 1.45
NSFL1C-201ENST00000216879 CSRNP3Q8WYN3 585 aa24.07■■□□□ 1.44
NSFL1C-201ENST00000216879 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
NSFL1C-201ENST00000216879 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
NSFL1C-201ENST00000216879 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
NSFL1C-201ENST00000216879 KCNH8Q96L42 1107 aa24.02■■□□□ 1.44
NSFL1C-201ENST00000216879 ITGAEP38570 1179 aa24■■□□□ 1.43
NSFL1C-201ENST00000216879 WIZO95785 1651 aa23.95■■□□□ 1.42
NSFL1C-201ENST00000216879 FKBP8Q14318 412 aa23.94■■□□□ 1.42
NSFL1C-201ENST00000216879 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
NSFL1C-201ENST00000216879 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
NSFL1C-201ENST00000216879 TNIKQ9UKE5 1360 aa23.9■■□□□ 1.42
NSFL1C-201ENST00000216879 NEFLP07196 543 aa23.73■■□□□ 1.39
NSFL1C-201ENST00000216879 TRIM52Q96A61 297 aa23.73■■□□□ 1.39
NSFL1C-201ENST00000216879 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
NSFL1C-201ENST00000216879 DDX10Q13206 875 aaKnown RBP23.7■■□□□ 1.38
NSFL1C-201ENST00000216879 CLSPNQ9HAW4 1339 aa23.68■■□□□ 1.38
NSFL1C-201ENST00000216879 CLIP1P30622 1438 aa23.67■■□□□ 1.38
NSFL1C-201ENST00000216879 RBM19Q9Y4C8 960 aaKnown RBP23.66■■□□□ 1.38
NSFL1C-201ENST00000216879 GOLGA3Q08378 1498 aa23.63■■□□□ 1.37
NSFL1C-201ENST00000216879 ERICH6Q7L0X2 663 aa23.61■■□□□ 1.37
NSFL1C-201ENST00000216879 IRX6P78412 446 aaPredicted RBP23.6■■□□□ 1.37
NSFL1C-201ENST00000216879 DHX57Q6P158 1386 aaKnown RBP23.56■■□□□ 1.36
NSFL1C-201ENST00000216879 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
NSFL1C-201ENST00000216879 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
NSFL1C-201ENST00000216879 VPS8Q8N3P4 1428 aa23.44■■□□□ 1.34
NSFL1C-201ENST00000216879 SIN3AQ96ST3 1273 aa23.41■■□□□ 1.34
NSFL1C-201ENST00000216879 EEA1Q15075 1411 aa23.4■■□□□ 1.34
NSFL1C-201ENST00000216879 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
NSFL1C-201ENST00000216879 MSH5O43196 834 aa23.39■■□□□ 1.34
NSFL1C-201ENST00000216879 EIF4G1Q04637 1599 aaKnown RBP23.37■■□□□ 1.33
NSFL1C-201ENST00000216879 ATP1B4Q9UN42 357 aaPredicted RBP23.36■■□□□ 1.33
NSFL1C-201ENST00000216879 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
NSFL1C-201ENST00000216879 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
NSFL1C-201ENST00000216879 ANP32CO43423 234 aa23.3■■□□□ 1.32
NSFL1C-201ENST00000216879 FAM50AQ14320 339 aaKnown RBP23.29■■□□□ 1.32
NSFL1C-201ENST00000216879 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
NSFL1C-201ENST00000216879 SMARCA2P51531 1590 aa23.24■■□□□ 1.31
NSFL1C-201ENST00000216879 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
NSFL1C-201ENST00000216879 HNRNPUQ00839 825 aaKnown RBP eCLIP23.23■■□□□ 1.31
NSFL1C-201ENST00000216879 NBR1Q14596 966 aa23.22■■□□□ 1.31
NSFL1C-201ENST00000216879 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
NSFL1C-201ENST00000216879 NACADO15069 1562 aa23.21■■□□□ 1.31
NSFL1C-201ENST00000216879 KIF21BO75037 1637 aa23.14■■□□□ 1.29
NSFL1C-201ENST00000216879 RAB3GAP2Q9H2M9 1393 aa23.13■■□□□ 1.29
NSFL1C-201ENST00000216879 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
NSFL1C-201ENST00000216879 SENP3-EIF4A1A0A087X0R7 540 aa23.09■■□□□ 1.29
NSFL1C-201ENST00000216879 DEKP35659 375 aaKnown RBP23.08■■□□□ 1.29
NSFL1C-201ENST00000216879 P3H3Q8IVL6 736 aa23.07■■□□□ 1.28
NSFL1C-201ENST00000216879 B4GALNT3Q6L9W6 998 aa23.04■■□□□ 1.28
NSFL1C-201ENST00000216879 PPP1R15AO75807 674 aaPredicted RBP23.04■■□□□ 1.28
NSFL1C-201ENST00000216879 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
NSFL1C-201ENST00000216879 SMARCA4P51532 1647 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms