RNA–Protein interactions for RNA: ENST00000321143.8

HCCS-201, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HCCS, Length 2,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-201ENST00000321143 NISCHQ9Y2I1 1504 aa40.85■■■■■ 4.13
HCCS-201ENST00000321143 CCDC180Q9P1Z9 1646 aa35.48■■■■□ 3.27
HCCS-201ENST00000321143 ZCCHC6Q5VYS8 1495 aaKnown RBP34.27■■■■□ 3.08
HCCS-201ENST00000321143 DCAF8L2P0C7V8 631 aa34.11■■■■□ 3.05
HCCS-201ENST00000321143 ABCC9O60706 1549 aa33.99■■■■□ 3.03
HCCS-201ENST00000321143 SHROOM4Q9ULL8 1493 aa33.74■■■□□ 2.99
HCCS-201ENST00000321143 DCAF1Q9Y4B6 1507 aa33.57■■■□□ 2.96
HCCS-201ENST00000321143 MYO15BQ96JP2 1530 aa33.15■■■□□ 2.9
HCCS-201ENST00000321143 NACADO15069 1562 aa33.1■■■□□ 2.89
HCCS-201ENST00000321143 SUPT5HO00267 1087 aaKnown RBP33.01■■■□□ 2.87
HCCS-201ENST00000321143 SCRIBQ14160 1630 aa32.92■■■□□ 2.86
HCCS-201ENST00000321143 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
HCCS-201ENST00000321143 UNC13AQ9UPW8 1703 aa32.44■■■□□ 2.78
HCCS-201ENST00000321143 PABPN1Q86U42 306 aaKnown RBP eCLIP32.17■■■□□ 2.74
HCCS-201ENST00000321143 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
HCCS-201ENST00000321143 BICRAQ9NZM4 1560 aa32.06■■■□□ 2.72
HCCS-201ENST00000321143 CECR2Q9BXF3 1484 aa31.95■■■□□ 2.71
HCCS-201ENST00000321143 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
HCCS-201ENST00000321143 MROH2BQ7Z745 1585 aa31.69■■■□□ 2.66
HCCS-201ENST00000321143 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
HCCS-201ENST00000321143 WIZO95785 1651 aa31.45■■■□□ 2.63
HCCS-201ENST00000321143 SMARCA4P51532 1647 aa31.43■■■□□ 2.62
HCCS-201ENST00000321143 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
HCCS-201ENST00000321143 LOC105371045A0A1W2PR82 267 aa31.03■■■□□ 2.56
HCCS-201ENST00000321143 ATAD2BQ9ULI0 1458 aa30.96■■■□□ 2.55
HCCS-201ENST00000321143 PEG3Q9GZU2 1588 aa30.93■■■□□ 2.54
HCCS-201ENST00000321143 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
HCCS-201ENST00000321143 TRIM41Q8WV44 630 aa30.84■■■□□ 2.53
HCCS-201ENST00000321143 PCGF6Q9BYE7 350 aa30.81■■■□□ 2.52
HCCS-201ENST00000321143 SMARCA2P51531 1590 aa30.8■■■□□ 2.52
HCCS-201ENST00000321143 BAZ1BQ9UIG0 1483 aaKnown RBP30.75■■■□□ 2.51
HCCS-201ENST00000321143 CCDC88BA6NC98 1476 aa30.74■■■□□ 2.51
HCCS-201ENST00000321143 HRCP23327 699 aa30.74■■■□□ 2.51
HCCS-201ENST00000321143 CC2D2AQ9P2K1 1620 aa30.67■■■□□ 2.5
HCCS-201ENST00000321143 NCAPD3P42695 1498 aa30.62■■■□□ 2.49
HCCS-201ENST00000321143 HMGXB3Q12766 1538 aa30.5■■■□□ 2.47
HCCS-201ENST00000321143 FAM9AQ8IZU1 332 aaPredicted RBP30.48■■■□□ 2.47
HCCS-201ENST00000321143 TRIM26Q12899 539 aaPredicted RBP30.37■■■□□ 2.45
HCCS-201ENST00000321143 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
HCCS-201ENST00000321143 ABCC8Q09428 1581 aa30.18■■■□□ 2.42
HCCS-201ENST00000321143 EHMT2Q96KQ7 1210 aa30.13■■■□□ 2.41
HCCS-201ENST00000321143 PPARGC1BQ86YN6 1023 aaKnown RBP30.01■■■□□ 2.39
HCCS-201ENST00000321143 CFTRP13569 1480 aa29.95■■■□□ 2.39
HCCS-201ENST00000321143 CADPSQ9ULU8 1353 aa29.89■■■□□ 2.37
HCCS-201ENST00000321143 NESP48681 1621 aa29.87■■■□□ 2.37
HCCS-201ENST00000321143 WRNQ14191 1432 aaPredicted RBP eCLIP29.83■■■□□ 2.37
HCCS-201ENST00000321143 SYNJ1O43426 1573 aa29.79■■■□□ 2.36
HCCS-201ENST00000321143 PRDM2Q13029 1718 aa29.72■■■□□ 2.35
HCCS-201ENST00000321143 SOGA1O94964 1423 aa29.72■■■□□ 2.35
HCCS-201ENST00000321143 EEA1Q15075 1411 aa29.68■■■□□ 2.34
HCCS-201ENST00000321143 ZEB1P37275 1124 aaPredicted RBP29.68■■■□□ 2.34
HCCS-201ENST00000321143 CUX1P39880 1505 aa29.59■■■□□ 2.33
HCCS-201ENST00000321143 FANCD2Q9BXW9 1451 aa29.59■■■□□ 2.33
HCCS-201ENST00000321143 CSRNP3Q8WYN3 585 aa29.58■■■□□ 2.33
HCCS-201ENST00000321143 RUSC2Q8N2Y8 1516 aa29.57■■■□□ 2.32
HCCS-201ENST00000321143 TOP2BQ02880 1626 aa29.55■■■□□ 2.32
HCCS-201ENST00000321143 LAMC3Q9Y6N6 1575 aa29.55■■■□□ 2.32
HCCS-201ENST00000321143 TNIKQ9UKE5 1360 aa29.54■■■□□ 2.32
HCCS-201ENST00000321143 CEP162Q5TB80 1403 aa29.53■■■□□ 2.32
HCCS-201ENST00000321143 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
HCCS-201ENST00000321143 GOLGA3Q08378 1498 aa29.41■■■□□ 2.3
HCCS-201ENST00000321143 KIF21AQ7Z4S6 1674 aa29.41■■■□□ 2.3
HCCS-201ENST00000321143 UBTFP17480 764 aaKnown RBP29.39■■■□□ 2.3
HCCS-201ENST00000321143 CEP164Q9UPV0 1460 aa29.35■■■□□ 2.29
HCCS-201ENST00000321143 PDS5BQ9NTI5 1447 aa29.35■■■□□ 2.29
HCCS-201ENST00000321143 URB2Q14146 1524 aaKnown RBP29.28■■■□□ 2.28
HCCS-201ENST00000321143 FGD5Q6ZNL6 1462 aa29.27■■■□□ 2.28
HCCS-201ENST00000321143 TOPBP1Q92547 1522 aa29.26■■■□□ 2.27
HCCS-201ENST00000321143 KIF21BO75037 1637 aa29.26■■■□□ 2.27
HCCS-201ENST00000321143 DNMBPQ6XZF7 1577 aa29.22■■■□□ 2.27
HCCS-201ENST00000321143 RAD54L2Q9Y4B4 1467 aa29.16■■■□□ 2.26
HCCS-201ENST00000321143 POLA1P09884 1462 aaPredicted RBP29.14■■■□□ 2.26
HCCS-201ENST00000321143 TTBK1Q5TCY1 1321 aaPredicted RBP29.13■■■□□ 2.25
HCCS-201ENST00000321143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.11■■■□□ 2.25
HCCS-201ENST00000321143 CUX2O14529 1486 aa29.07■■■□□ 2.24
HCCS-201ENST00000321143 CCER1Q8TC90 406 aaPredicted RBP29.06■■■□□ 2.24
HCCS-201ENST00000321143 CLIP1P30622 1438 aa29.03■■■□□ 2.24
HCCS-201ENST00000321143 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
HCCS-201ENST00000321143 RAPGEF2Q9Y4G8 1499 aa29.03■■■□□ 2.24
HCCS-201ENST00000321143 KIF27Q86VH2 1401 aa29.02■■■□□ 2.24
HCCS-201ENST00000321143 MRC2Q9UBG0 1479 aa29■■■□□ 2.23
HCCS-201ENST00000321143 ABCA10Q8WWZ4 1543 aa28.91■■■□□ 2.22
HCCS-201ENST00000321143 VPS8Q8N3P4 1428 aa28.9■■■□□ 2.22
HCCS-201ENST00000321143 IGF1RP08069 1367 aa28.89■■■□□ 2.22
HCCS-201ENST00000321143 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
HCCS-201ENST00000321143 WDR62O43379 1518 aa28.85■■■□□ 2.21
HCCS-201ENST00000321143 THOC2Q8NI27 1593 aaKnown RBP28.85■■■□□ 2.21
HCCS-201ENST00000321143 WDR97A6NE52 1622 aa28.84■■■□□ 2.21
HCCS-201ENST00000321143 PRXQ9BXM0 1461 aa28.84■■■□□ 2.21
HCCS-201ENST00000321143 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
HCCS-201ENST00000321143 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
HCCS-201ENST00000321143 RANGAP1P46060 587 aaPredicted RBP28.75■■■□□ 2.19
HCCS-201ENST00000321143 APLP2Q06481 763 aa28.73■■■□□ 2.19
HCCS-201ENST00000321143 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.195e-6■■■□□ 16.9
HCCS-201ENST00000321143 CARMIL1Q5VZK9 1371 aa28.71■■■□□ 2.19
HCCS-201ENST00000321143 ABCA5Q8WWZ7 1642 aa28.7■■■□□ 2.19
HCCS-201ENST00000321143 ZNF608Q9ULD9 1512 aaPredicted RBP28.7■■■□□ 2.18
HCCS-201ENST00000321143 GAPVD1Q14C86 1478 aa28.68■■■□□ 2.18
HCCS-201ENST00000321143 IFT140Q96RY7 1462 aa28.61■■■□□ 2.17
HCCS-201ENST00000321143 ARAP1Q96P48 1450 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms