RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 NISCHQ9Y2I1 1504 aa37.68■■■■□ 3.62
TNIP1-221ENST00000610874 CCDC180Q9P1Z9 1646 aa32.31■■■□□ 2.76
TNIP1-221ENST00000610874 SHROOM4Q9ULL8 1493 aa31.75■■■□□ 2.67
TNIP1-221ENST00000610874 DCAF8L2P0C7V8 631 aa31.69■■■□□ 2.66
TNIP1-221ENST00000610874 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
TNIP1-221ENST00000610874 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
TNIP1-221ENST00000610874 SUPT5HO00267 1087 aaKnown RBP30.77■■■□□ 2.52
TNIP1-221ENST00000610874 ABCC9O60706 1549 aa30.77■■■□□ 2.52
TNIP1-221ENST00000610874 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
TNIP1-221ENST00000610874 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.43
TNIP1-221ENST00000610874 NACADO15069 1562 aa30.09■■■□□ 2.41
TNIP1-221ENST00000610874 RB1CC1Q8TDY2 1594 aa29.79■■■□□ 2.36
TNIP1-221ENST00000610874 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
TNIP1-221ENST00000610874 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
TNIP1-221ENST00000610874 CECR2Q9BXF3 1484 aa29.51■■■□□ 2.31
TNIP1-221ENST00000610874 HRCP23327 699 aa29.33■■■□□ 2.29
TNIP1-221ENST00000610874 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
TNIP1-221ENST00000610874 UNC13AQ9UPW8 1703 aa29.32■■■□□ 2.28
TNIP1-221ENST00000610874 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
TNIP1-221ENST00000610874 PCGF6Q9BYE7 350 aa29.16■■■□□ 2.26
TNIP1-221ENST00000610874 WIZO95785 1651 aa29.09■■■□□ 2.25
TNIP1-221ENST00000610874 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.23
TNIP1-221ENST00000610874 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
TNIP1-221ENST00000610874 SMARCA4P51532 1647 aa28.84■■■□□ 2.21
TNIP1-221ENST00000610874 PPARGC1BQ86YN6 1023 aaKnown RBP28.8■■■□□ 2.2
TNIP1-221ENST00000610874 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
TNIP1-221ENST00000610874 TRIM41Q8WV44 630 aa28.67■■■□□ 2.18
TNIP1-221ENST00000610874 TOP2AP11388 1531 aaKnown RBP28.57■■■□□ 2.16
TNIP1-221ENST00000610874 FAM9AQ8IZU1 332 aaPredicted RBP28.5■■■□□ 2.15
TNIP1-221ENST00000610874 CCDC88BA6NC98 1476 aa28.5■■■□□ 2.15
TNIP1-221ENST00000610874 SMARCA2P51531 1590 aa28.41■■■□□ 2.14
TNIP1-221ENST00000610874 TRIM26Q12899 539 aaPredicted RBP28.39■■■□□ 2.14
TNIP1-221ENST00000610874 EHMT2Q96KQ7 1210 aa28.36■■■□□ 2.13
TNIP1-221ENST00000610874 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
TNIP1-221ENST00000610874 PEG3Q9GZU2 1588 aa28.26■■■□□ 2.11
TNIP1-221ENST00000610874 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.11
TNIP1-221ENST00000610874 BAZ1BQ9UIG0 1483 aaKnown RBP28.21■■■□□ 2.11
TNIP1-221ENST00000610874 ABCC8Q09428 1581 aa28.2■■■□□ 2.11
TNIP1-221ENST00000610874 ZEB1P37275 1124 aaPredicted RBP27.89■■■□□ 2.06
TNIP1-221ENST00000610874 NCAPD3P42695 1498 aa27.87■■■□□ 2.05
TNIP1-221ENST00000610874 SOGA1O94964 1423 aa27.8■■■□□ 2.04
TNIP1-221ENST00000610874 WRNQ14191 1432 aaPredicted RBP eCLIP27.79■■■□□ 2.04
TNIP1-221ENST00000610874 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
TNIP1-221ENST00000610874 RUSC2Q8N2Y8 1516 aa27.71■■■□□ 2.03
TNIP1-221ENST00000610874 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
TNIP1-221ENST00000610874 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
TNIP1-221ENST00000610874 CSRNP3Q8WYN3 585 aa27.56■■■□□ 2
TNIP1-221ENST00000610874 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.99
TNIP1-221ENST00000610874 CFTRP13569 1480 aa27.45■■□□□ 1.98
TNIP1-221ENST00000610874 EEA1Q15075 1411 aa27.39■■□□□ 1.97
TNIP1-221ENST00000610874 TOP2BQ02880 1626 aa27.35■■□□□ 1.97
TNIP1-221ENST00000610874 SCAF1Q9H7N4 1312 aaKnown RBP27.34■■□□□ 1.97
TNIP1-221ENST00000610874 CADPSQ9ULU8 1353 aa27.33■■□□□ 1.97
TNIP1-221ENST00000610874 DNAJC5BQ9UF47 199 aa27.32■■□□□ 1.96
TNIP1-221ENST00000610874 CUX1P39880 1505 aa27.31■■□□□ 1.96
TNIP1-221ENST00000610874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
TNIP1-221ENST00000610874 CEP162Q5TB80 1403 aa27.27■■□□□ 1.96
TNIP1-221ENST00000610874 TNIKQ9UKE5 1360 aa27.24■■□□□ 1.95
TNIP1-221ENST00000610874 BIVM-ERCC5R4GMW8 1640 aa27.23■■□□□ 1.95
TNIP1-221ENST00000610874 RANGAP1P46060 587 aaPredicted RBP27.23■■□□□ 1.95
TNIP1-221ENST00000610874 CCER1Q8TC90 406 aaPredicted RBP27.23■■□□□ 1.95
TNIP1-221ENST00000610874 GOLGA3Q08378 1498 aa27.22■■□□□ 1.95
TNIP1-221ENST00000610874 TTBK1Q5TCY1 1321 aaPredicted RBP27.21■■□□□ 1.95
TNIP1-221ENST00000610874 NESP48681 1621 aa27.18■■□□□ 1.94
TNIP1-221ENST00000610874 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
TNIP1-221ENST00000610874 RAPGEF2Q9Y4G8 1499 aa27.14■■□□□ 1.93
TNIP1-221ENST00000610874 PELP1Q8IZL8 1130 aaKnown RBP27.12■■□□□ 1.93
TNIP1-221ENST00000610874 PRDM2Q13029 1718 aa27.09■■□□□ 1.93
TNIP1-221ENST00000610874 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
TNIP1-221ENST00000610874 KIF21BO75037 1637 aa27.06■■□□□ 1.92
TNIP1-221ENST00000610874 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
TNIP1-221ENST00000610874 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
TNIP1-221ENST00000610874 CUX2O14529 1486 aa26.94■■□□□ 1.9
TNIP1-221ENST00000610874 CLIP1P30622 1438 aa26.93■■□□□ 1.9
TNIP1-221ENST00000610874 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
TNIP1-221ENST00000610874 PRXQ9BXM0 1461 aa26.9■■□□□ 1.9
TNIP1-221ENST00000610874 DIEXFQ68CQ4 756 aaKnown RBP26.89■■□□□ 1.9
TNIP1-221ENST00000610874 NEUROD1Q13562 356 aa26.88■■□□□ 1.89
TNIP1-221ENST00000610874 RAD54L2Q9Y4B4 1467 aa26.83■■□□□ 1.89
TNIP1-221ENST00000610874 IGF1RP08069 1367 aa26.8■■□□□ 1.88
TNIP1-221ENST00000610874 TOPBP1Q92547 1522 aa26.79■■□□□ 1.88
TNIP1-221ENST00000610874 LAMC3Q9Y6N6 1575 aa26.78■■□□□ 1.88
TNIP1-221ENST00000610874 ERICH3Q5RHP9 1530 aa26.76■■□□□ 1.87
TNIP1-221ENST00000610874 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
TNIP1-221ENST00000610874 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
TNIP1-221ENST00000610874 URB2Q14146 1524 aaKnown RBP26.71■■□□□ 1.87
TNIP1-221ENST00000610874 CENPBP07199 599 aaPredicted RBP26.7■■□□□ 1.86
TNIP1-221ENST00000610874 PDS5BQ9NTI5 1447 aa26.69■■□□□ 1.86
TNIP1-221ENST00000610874 CARMIL1Q5VZK9 1371 aa26.68■■□□□ 1.86
TNIP1-221ENST00000610874 VPS8Q8N3P4 1428 aa26.67■■□□□ 1.86
TNIP1-221ENST00000610874 GTF3C3Q9Y5Q9 886 aa26.67■■□□□ 1.86
TNIP1-221ENST00000610874 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
TNIP1-221ENST00000610874 APLP2Q06481 763 aa26.62■■□□□ 1.85
TNIP1-221ENST00000610874 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
TNIP1-221ENST00000610874 ABCA10Q8WWZ4 1543 aa26.57■■□□□ 1.84
TNIP1-221ENST00000610874 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
TNIP1-221ENST00000610874 ZNF316A6NFI3 1004 aaPredicted RBP26.54■■□□□ 1.84
TNIP1-221ENST00000610874 P3H3Q8IVL6 736 aa26.48■■□□□ 1.83
TNIP1-221ENST00000610874 ARHGAP35Q9NRY4 1499 aa26.48■■□□□ 1.83
TNIP1-221ENST00000610874 HNRNPUL2Q1KMD3 747 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms