Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.85■■■□□ 2.53
SNCAIPQ9Y6H5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.84■■■□□ 2.53
SNCAIPQ9Y6H5 LINC00273-201ENST00000539813 1452 ntBASIC30.83■■■□□ 2.53
SNCAIPQ9Y6H5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
SNCAIPQ9Y6H5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SNCAIPQ9Y6H5 GPX1-201ENST00000419349 1106 ntBASIC30.82■■■□□ 2.52
SNCAIPQ9Y6H5 AL161658.1-201ENST00000623641 1967 ntBASIC30.81■■■□□ 2.52
SNCAIPQ9Y6H5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SNCAIPQ9Y6H5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SNCAIPQ9Y6H5 ABHD17AP5-201ENST00000580133 923 ntBASIC30.8■■■□□ 2.52
SNCAIPQ9Y6H5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.8■■■□□ 2.52
SNCAIPQ9Y6H5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.8■■■□□ 2.52
SNCAIPQ9Y6H5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SNCAIPQ9Y6H5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.79■■■□□ 2.52
SNCAIPQ9Y6H5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SNCAIPQ9Y6H5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SNCAIPQ9Y6H5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SNCAIPQ9Y6H5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNCAIPQ9Y6H5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SNCAIPQ9Y6H5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.78■■■□□ 2.52
SNCAIPQ9Y6H5 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SNCAIPQ9Y6H5 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
SNCAIPQ9Y6H5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.76■■■□□ 2.51
SNCAIPQ9Y6H5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
SNCAIPQ9Y6H5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.75■■■□□ 2.51
SNCAIPQ9Y6H5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
SNCAIPQ9Y6H5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
SNCAIPQ9Y6H5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SNCAIPQ9Y6H5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SNCAIPQ9Y6H5 RNF126P1-201ENST00000567452 1320 ntBASIC30.73■■■□□ 2.51
SNCAIPQ9Y6H5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SNCAIPQ9Y6H5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.73■■■□□ 2.51
SNCAIPQ9Y6H5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
SNCAIPQ9Y6H5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SNCAIPQ9Y6H5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SNCAIPQ9Y6H5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
SNCAIPQ9Y6H5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SNCAIPQ9Y6H5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNCAIPQ9Y6H5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNCAIPQ9Y6H5 AC010864.1-201ENST00000609407 1511 ntBASIC30.69■■■□□ 2.5
SNCAIPQ9Y6H5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.69■■■□□ 2.5
SNCAIPQ9Y6H5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
SNCAIPQ9Y6H5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
SNCAIPQ9Y6H5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SNCAIPQ9Y6H5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SNCAIPQ9Y6H5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.67■■■□□ 2.5
SNCAIPQ9Y6H5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
SNCAIPQ9Y6H5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SNCAIPQ9Y6H5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNCAIPQ9Y6H5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.65■■■□□ 2.5
SNCAIPQ9Y6H5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SNCAIPQ9Y6H5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
SNCAIPQ9Y6H5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SNCAIPQ9Y6H5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.64■■■□□ 2.5
SNCAIPQ9Y6H5 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SNCAIPQ9Y6H5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
SNCAIPQ9Y6H5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
SNCAIPQ9Y6H5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.61■■■□□ 2.49
SNCAIPQ9Y6H5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SNCAIPQ9Y6H5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SNCAIPQ9Y6H5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SNCAIPQ9Y6H5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
SNCAIPQ9Y6H5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SNCAIPQ9Y6H5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SNCAIPQ9Y6H5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.57■■■□□ 2.48
SNCAIPQ9Y6H5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
SNCAIPQ9Y6H5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SNCAIPQ9Y6H5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.56■■■□□ 2.48
SNCAIPQ9Y6H5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.54■■■□□ 2.48
SNCAIPQ9Y6H5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.54■■■□□ 2.48
SNCAIPQ9Y6H5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.54■■■□□ 2.48
SNCAIPQ9Y6H5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.54■■■□□ 2.48
SNCAIPQ9Y6H5 AC022413.1-201ENST00000624602 984 ntBASIC30.54■■■□□ 2.48
SNCAIPQ9Y6H5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SNCAIPQ9Y6H5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SNCAIPQ9Y6H5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.53■■■□□ 2.48
SNCAIPQ9Y6H5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.52■■■□□ 2.48
SNCAIPQ9Y6H5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SNCAIPQ9Y6H5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
SNCAIPQ9Y6H5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SNCAIPQ9Y6H5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.51■■■□□ 2.47
SNCAIPQ9Y6H5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
SNCAIPQ9Y6H5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SNCAIPQ9Y6H5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
SNCAIPQ9Y6H5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SNCAIPQ9Y6H5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SNCAIPQ9Y6H5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SNCAIPQ9Y6H5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SNCAIPQ9Y6H5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SNCAIPQ9Y6H5 NTF6A-201ENST00000591175 560 ntBASIC30.48■■■□□ 2.47
SNCAIPQ9Y6H5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
SNCAIPQ9Y6H5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNCAIPQ9Y6H5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNCAIPQ9Y6H5 AC008813.1-201ENST00000536597 885 ntBASIC30.47■■■□□ 2.47
SNCAIPQ9Y6H5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SNCAIPQ9Y6H5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.46■■■□□ 2.47
SNCAIPQ9Y6H5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SNCAIPQ9Y6H5 WHAMMP2-203ENST00000563942 1603 ntBASIC30.44■■■□□ 2.46
SNCAIPQ9Y6H5 AC127502.1-201ENST00000399971 1502 ntBASIC30.44■■■□□ 2.46
SNCAIPQ9Y6H5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms