Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RCL1Q9Y2P8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RCL1Q9Y2P8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RCL1Q9Y2P8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RCL1Q9Y2P8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RCL1Q9Y2P8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RCL1Q9Y2P8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RCL1Q9Y2P8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RCL1Q9Y2P8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RCL1Q9Y2P8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RCL1Q9Y2P8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RCL1Q9Y2P8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RCL1Q9Y2P8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
RCL1Q9Y2P8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 BX255925.1-201ENST00000566954 1854 ntBASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RCL1Q9Y2P8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RCL1Q9Y2P8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RCL1Q9Y2P8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.04■□□□□ 0.96
RCL1Q9Y2P8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 ZNRF2P1-201ENST00000441407 443 ntBASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCL1Q9Y2P8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCL1Q9Y2P8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCL1Q9Y2P8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RCL1Q9Y2P8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.01■□□□□ 0.95
RCL1Q9Y2P8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
RCL1Q9Y2P8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RCL1Q9Y2P8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RCL1Q9Y2P8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RCL1Q9Y2P8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RCL1Q9Y2P8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCL1Q9Y2P8 AL031258.1-201ENST00000623562 325 ntBASIC20.99■□□□□ 0.95
RCL1Q9Y2P8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RCL1Q9Y2P8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 AC010864.1-201ENST00000609407 1511 ntBASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.96■□□□□ 0.95
RCL1Q9Y2P8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RCL1Q9Y2P8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.96■□□□□ 0.95
RCL1Q9Y2P8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RCL1Q9Y2P8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCL1Q9Y2P8 WASH5P-204ENST00000632292 975 ntBASIC20.93■□□□□ 0.94
RCL1Q9Y2P8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCL1Q9Y2P8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCL1Q9Y2P8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.91■□□□□ 0.94
RCL1Q9Y2P8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.91■□□□□ 0.94
RCL1Q9Y2P8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
RCL1Q9Y2P8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RCL1Q9Y2P8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 AL449106.1-201ENST00000608517 1980 ntBASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms