Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LAMP3Q9UQV4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LAMP3Q9UQV4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LAMP3Q9UQV4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LAMP3Q9UQV4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.47■■□□□ 1.19
LAMP3Q9UQV4 DUX4L13-201ENST00000554103 1267 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L15-201ENST00000611059 1267 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L23-201ENST00000615195 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L24-201ENST00000617576 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L22-201ENST00000618238 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L20-201ENST00000619712 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L21-201ENST00000622058 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L10-201ENST00000622460 1267 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L25-201ENST00000624915 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LAMP3Q9UQV4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LAMP3Q9UQV4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.45■■□□□ 1.18
LAMP3Q9UQV4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.45■■□□□ 1.18
LAMP3Q9UQV4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LAMP3Q9UQV4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
LAMP3Q9UQV4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LAMP3Q9UQV4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LAMP3Q9UQV4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
LAMP3Q9UQV4 HSD17B1P1-201ENST00000590052 955 ntBASIC22.41■■□□□ 1.18
LAMP3Q9UQV4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
LAMP3Q9UQV4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LAMP3Q9UQV4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.39■■□□□ 1.17
LAMP3Q9UQV4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.39■■□□□ 1.17
LAMP3Q9UQV4 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.39■■□□□ 1.17
LAMP3Q9UQV4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
LAMP3Q9UQV4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LAMP3Q9UQV4 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.38■■□□□ 1.17
LAMP3Q9UQV4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LAMP3Q9UQV4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LAMP3Q9UQV4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LAMP3Q9UQV4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.36■■□□□ 1.17
LAMP3Q9UQV4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
LAMP3Q9UQV4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LAMP3Q9UQV4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.34■■□□□ 1.17
LAMP3Q9UQV4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LAMP3Q9UQV4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.31■■□□□ 1.16
LAMP3Q9UQV4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LAMP3Q9UQV4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LAMP3Q9UQV4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 AC010864.1-201ENST00000609407 1511 ntBASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.29■■□□□ 1.16
LAMP3Q9UQV4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.29■■□□□ 1.16
LAMP3Q9UQV4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.29■■□□□ 1.16
LAMP3Q9UQV4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.29■■□□□ 1.16
LAMP3Q9UQV4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
LAMP3Q9UQV4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LAMP3Q9UQV4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.28■■□□□ 1.16
LAMP3Q9UQV4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LAMP3Q9UQV4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.27■■□□□ 1.16
LAMP3Q9UQV4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAMP3Q9UQV4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LAMP3Q9UQV4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAMP3Q9UQV4 LINC00273-201ENST00000539813 1452 ntBASIC22.26■■□□□ 1.15
LAMP3Q9UQV4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAMP3Q9UQV4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.24■■□□□ 1.15
LAMP3Q9UQV4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAMP3Q9UQV4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAMP3Q9UQV4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LAMP3Q9UQV4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.23■■□□□ 1.15
LAMP3Q9UQV4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LAMP3Q9UQV4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LAMP3Q9UQV4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms