Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SND1-IT1Q9HBX3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SND1-IT1Q9HBX3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SND1-IT1Q9HBX3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SND1-IT1Q9HBX3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SND1-IT1Q9HBX3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SND1-IT1Q9HBX3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.23■□□□□ 0.35
SND1-IT1Q9HBX3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SND1-IT1Q9HBX3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SND1-IT1Q9HBX3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SND1-IT1Q9HBX3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SND1-IT1Q9HBX3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SND1-IT1Q9HBX3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SND1-IT1Q9HBX3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.2■□□□□ 0.34
SND1-IT1Q9HBX3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SND1-IT1Q9HBX3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SND1-IT1Q9HBX3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.2■□□□□ 0.34
SND1-IT1Q9HBX3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SND1-IT1Q9HBX3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SND1-IT1Q9HBX3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.18■□□□□ 0.34
SND1-IT1Q9HBX3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SND1-IT1Q9HBX3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SND1-IT1Q9HBX3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SND1-IT1Q9HBX3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SND1-IT1Q9HBX3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SND1-IT1Q9HBX3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SND1-IT1Q9HBX3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SND1-IT1Q9HBX3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SND1-IT1Q9HBX3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.16■□□□□ 0.34
SND1-IT1Q9HBX3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SND1-IT1Q9HBX3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SND1-IT1Q9HBX3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SND1-IT1Q9HBX3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SND1-IT1Q9HBX3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SND1-IT1Q9HBX3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.14■□□□□ 0.33
SND1-IT1Q9HBX3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.14■□□□□ 0.33
SND1-IT1Q9HBX3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.14■□□□□ 0.33
SND1-IT1Q9HBX3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SND1-IT1Q9HBX3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SND1-IT1Q9HBX3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SND1-IT1Q9HBX3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.14■□□□□ 0.33
SND1-IT1Q9HBX3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SND1-IT1Q9HBX3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SND1-IT1Q9HBX3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SND1-IT1Q9HBX3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.13■□□□□ 0.33
SND1-IT1Q9HBX3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SND1-IT1Q9HBX3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SND1-IT1Q9HBX3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SND1-IT1Q9HBX3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SND1-IT1Q9HBX3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SND1-IT1Q9HBX3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SND1-IT1Q9HBX3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SND1-IT1Q9HBX3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SND1-IT1Q9HBX3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SND1-IT1Q9HBX3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SND1-IT1Q9HBX3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SND1-IT1Q9HBX3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.09■□□□□ 0.33
SND1-IT1Q9HBX3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SND1-IT1Q9HBX3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SND1-IT1Q9HBX3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SND1-IT1Q9HBX3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SND1-IT1Q9HBX3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SND1-IT1Q9HBX3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SND1-IT1Q9HBX3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SND1-IT1Q9HBX3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SND1-IT1Q9HBX3 WASH5P-204ENST00000632292 975 ntBASIC17.07■□□□□ 0.32
SND1-IT1Q9HBX3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.07■□□□□ 0.32
SND1-IT1Q9HBX3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SND1-IT1Q9HBX3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SND1-IT1Q9HBX3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SND1-IT1Q9HBX3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SND1-IT1Q9HBX3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
SND1-IT1Q9HBX3 AP002365.1-201ENST00000603448 772 ntBASIC17.06■□□□□ 0.32
SND1-IT1Q9HBX3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SND1-IT1Q9HBX3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SND1-IT1Q9HBX3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SND1-IT1Q9HBX3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SND1-IT1Q9HBX3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SND1-IT1Q9HBX3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SND1-IT1Q9HBX3 BX255925.1-201ENST00000566954 1854 ntBASIC17.05■□□□□ 0.32
SND1-IT1Q9HBX3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.04■□□□□ 0.32
SND1-IT1Q9HBX3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SND1-IT1Q9HBX3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SND1-IT1Q9HBX3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SND1-IT1Q9HBX3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SND1-IT1Q9HBX3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SND1-IT1Q9HBX3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SND1-IT1Q9HBX3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SND1-IT1Q9HBX3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SND1-IT1Q9HBX3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SND1-IT1Q9HBX3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms