Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
VPS33BQ9H267 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
VPS33BQ9H267 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.08■■■□□ 2.73
VPS33BQ9H267 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.08■■■□□ 2.73
VPS33BQ9H267 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
VPS33BQ9H267 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
VPS33BQ9H267 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC32.07■■■□□ 2.72
VPS33BQ9H267 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
VPS33BQ9H267 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.04■■■□□ 2.72
VPS33BQ9H267 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
VPS33BQ9H267 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
VPS33BQ9H267 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.03■■■□□ 2.72
VPS33BQ9H267 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.03■■■□□ 2.72
VPS33BQ9H267 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
VPS33BQ9H267 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
VPS33BQ9H267 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
VPS33BQ9H267 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
VPS33BQ9H267 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
VPS33BQ9H267 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32■■■□□ 2.71
VPS33BQ9H267 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
VPS33BQ9H267 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32■■■□□ 2.71
VPS33BQ9H267 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
VPS33BQ9H267 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.98■■■□□ 2.71
VPS33BQ9H267 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VPS33BQ9H267 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
VPS33BQ9H267 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
VPS33BQ9H267 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
VPS33BQ9H267 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
VPS33BQ9H267 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.97■■■□□ 2.71
VPS33BQ9H267 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.97■■■□□ 2.71
VPS33BQ9H267 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
VPS33BQ9H267 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.96■■■□□ 2.71
VPS33BQ9H267 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.95■■■□□ 2.71
VPS33BQ9H267 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
VPS33BQ9H267 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
VPS33BQ9H267 AC008813.1-201ENST00000536597 885 ntBASIC31.94■■■□□ 2.7
VPS33BQ9H267 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
VPS33BQ9H267 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.93■■■□□ 2.7
VPS33BQ9H267 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
VPS33BQ9H267 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
VPS33BQ9H267 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
VPS33BQ9H267 NTF6A-201ENST00000591175 560 ntBASIC31.91■■■□□ 2.7
VPS33BQ9H267 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.91■■■□□ 2.7
VPS33BQ9H267 AC022413.1-201ENST00000624602 984 ntBASIC31.91■■■□□ 2.7
VPS33BQ9H267 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
VPS33BQ9H267 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
VPS33BQ9H267 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.9■■■□□ 2.7
VPS33BQ9H267 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
VPS33BQ9H267 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VPS33BQ9H267 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
VPS33BQ9H267 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
VPS33BQ9H267 AC010864.1-201ENST00000609407 1511 ntBASIC31.86■■■□□ 2.69
VPS33BQ9H267 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.85■■■□□ 2.69
VPS33BQ9H267 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
VPS33BQ9H267 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.85■■■□□ 2.69
VPS33BQ9H267 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
VPS33BQ9H267 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.84■■■□□ 2.69
VPS33BQ9H267 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
VPS33BQ9H267 AC012354.3-201ENST00000623734 483 ntBASIC31.83■■■□□ 2.69
VPS33BQ9H267 AL161658.1-201ENST00000623641 1967 ntBASIC31.83■■■□□ 2.69
VPS33BQ9H267 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.82■■■□□ 2.68
VPS33BQ9H267 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
VPS33BQ9H267 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
VPS33BQ9H267 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
VPS33BQ9H267 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
VPS33BQ9H267 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
VPS33BQ9H267 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
VPS33BQ9H267 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
VPS33BQ9H267 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.8■■■□□ 2.68
VPS33BQ9H267 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
VPS33BQ9H267 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
VPS33BQ9H267 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
VPS33BQ9H267 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
VPS33BQ9H267 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.78■■■□□ 2.68
VPS33BQ9H267 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
VPS33BQ9H267 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
VPS33BQ9H267 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
VPS33BQ9H267 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
VPS33BQ9H267 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
VPS33BQ9H267 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
VPS33BQ9H267 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
VPS33BQ9H267 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.71■■■□□ 2.67
VPS33BQ9H267 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
VPS33BQ9H267 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
VPS33BQ9H267 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.7■■■□□ 2.67
VPS33BQ9H267 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
VPS33BQ9H267 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.7■■■□□ 2.66
VPS33BQ9H267 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
VPS33BQ9H267 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
VPS33BQ9H267 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.69■■■□□ 2.66
VPS33BQ9H267 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
VPS33BQ9H267 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.68■■■□□ 2.66
VPS33BQ9H267 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
VPS33BQ9H267 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
VPS33BQ9H267 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.67■■■□□ 2.66
VPS33BQ9H267 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms