Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 OR2A1-AS1-204ENST00000470435 602 ntBASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SYNE2Q8WXH0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC11.13□□□□□ -0.63
SYNE2Q8WXH0 CHML-204ENST00000638121 920 ntTSL 2 BASIC11.12□□□□□ -0.63
SYNE2Q8WXH0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC11.12□□□□□ -0.63
SYNE2Q8WXH0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC11.12□□□□□ -0.63
SYNE2Q8WXH0 RALB-208ENST00000631312 311 ntTSL 5 BASIC11.12□□□□□ -0.63
SYNE2Q8WXH0 RP9P-202ENST00000450133 1212 ntBASIC11.12□□□□□ -0.63
SYNE2Q8WXH0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SYNE2Q8WXH0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SYNE2Q8WXH0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYNE2Q8WXH0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC11.1□□□□□ -0.63
SYNE2Q8WXH0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYNE2Q8WXH0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SYNE2Q8WXH0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC11.1□□□□□ -0.63
SYNE2Q8WXH0 SPCS2P3-201ENST00000500401 656 ntBASIC11.09□□□□□ -0.63
SYNE2Q8WXH0 RARRES2P6-201ENST00000567333 442 ntBASIC11.09□□□□□ -0.63
SYNE2Q8WXH0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SYNE2Q8WXH0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SYNE2Q8WXH0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SYNE2Q8WXH0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
SYNE2Q8WXH0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC11.08□□□□□ -0.64
SYNE2Q8WXH0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SYNE2Q8WXH0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SYNE2Q8WXH0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SYNE2Q8WXH0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SYNE2Q8WXH0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC11.07□□□□□ -0.64
SYNE2Q8WXH0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SYNE2Q8WXH0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC11.07□□□□□ -0.64
SYNE2Q8WXH0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC11.06□□□□□ -0.64
SYNE2Q8WXH0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SYNE2Q8WXH0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
SYNE2Q8WXH0 GUSBP5-201ENST00000418136 578 ntBASIC11.06□□□□□ -0.64
SYNE2Q8WXH0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SYNE2Q8WXH0 AC104564.3-201ENST00000582367 638 ntBASIC11.05□□□□□ -0.64
SYNE2Q8WXH0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SYNE2Q8WXH0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SYNE2Q8WXH0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SYNE2Q8WXH0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SYNE2Q8WXH0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SYNE2Q8WXH0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
SYNE2Q8WXH0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC11.04□□□□□ -0.64
SYNE2Q8WXH0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC11.03□□□□□ -0.64
SYNE2Q8WXH0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SYNE2Q8WXH0 AL139246.5-201ENST00000606645 996 ntBASIC11.03□□□□□ -0.64
SYNE2Q8WXH0 KRT8P33-201ENST00000508125 1423 ntBASIC11.02□□□□□ -0.64
SYNE2Q8WXH0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
SYNE2Q8WXH0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SYNE2Q8WXH0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC11.02□□□□□ -0.65
SYNE2Q8WXH0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SYNE2Q8WXH0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC11.02□□□□□ -0.65
SYNE2Q8WXH0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SYNE2Q8WXH0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC11.02□□□□□ -0.65
SYNE2Q8WXH0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC11.01□□□□□ -0.65
SYNE2Q8WXH0 AC129492.7-201ENST00000622992 756 ntBASIC11.01□□□□□ -0.65
SYNE2Q8WXH0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
SYNE2Q8WXH0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SYNE2Q8WXH0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SYNE2Q8WXH0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SYNE2Q8WXH0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC11.01□□□□□ -0.65
SYNE2Q8WXH0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC11□□□□□ -0.65
SYNE2Q8WXH0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC11□□□□□ -0.65
SYNE2Q8WXH0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SYNE2Q8WXH0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC11□□□□□ -0.65
SYNE2Q8WXH0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SYNE2Q8WXH0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC11□□□□□ -0.65
SYNE2Q8WXH0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SYNE2Q8WXH0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SYNE2Q8WXH0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC11□□□□□ -0.65
SYNE2Q8WXH0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC10.99□□□□□ -0.65
SYNE2Q8WXH0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SYNE2Q8WXH0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC10.99□□□□□ -0.65
SYNE2Q8WXH0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SYNE2Q8WXH0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC10.99□□□□□ -0.65
SYNE2Q8WXH0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC10.99□□□□□ -0.65
SYNE2Q8WXH0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SYNE2Q8WXH0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
SYNE2Q8WXH0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms