Protein–RNA interactions for Protein: Q8WXF1

PSPC1, Paraspeckle component 1, humanhuman

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1Q8WXF1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
PSPC1Q8WXF1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PSPC1Q8WXF1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.78■■■□□ 2.2
PSPC1Q8WXF1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.78■■■□□ 2.2
PSPC1Q8WXF1 DUX4L11-201ENST00000611504 1267 ntBASIC28.78■■■□□ 2.2
PSPC1Q8WXF1 DUX4L12-201ENST00000614593 1267 ntBASIC28.78■■■□□ 2.2
PSPC1Q8WXF1 DUX4L14-201ENST00000621227 1267 ntBASIC28.78■■■□□ 2.2
PSPC1Q8WXF1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.78■■■□□ 2.2
PSPC1Q8WXF1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
PSPC1Q8WXF1 AC127502.1-201ENST00000399971 1502 ntBASIC28.76■■■□□ 2.19
PSPC1Q8WXF1 HLA-V-202ENST00000446817 847 ntBASIC28.76■■■□□ 2.19
PSPC1Q8WXF1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.76■■■□□ 2.19
PSPC1Q8WXF1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.76■■■□□ 2.19
PSPC1Q8WXF1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
PSPC1Q8WXF1 LINC00273-201ENST00000539813 1452 ntBASIC28.75■■■□□ 2.19
PSPC1Q8WXF1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.75■■■□□ 2.19
PSPC1Q8WXF1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.74■■■□□ 2.19
PSPC1Q8WXF1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PSPC1Q8WXF1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
PSPC1Q8WXF1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.72■■■□□ 2.19
PSPC1Q8WXF1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.72■■■□□ 2.19
PSPC1Q8WXF1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.72■■■□□ 2.19
PSPC1Q8WXF1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.72■■■□□ 2.19
PSPC1Q8WXF1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.72■■■□□ 2.19
PSPC1Q8WXF1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.71■■■□□ 2.19
PSPC1Q8WXF1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
PSPC1Q8WXF1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
PSPC1Q8WXF1 ST7-AS1-201ENST00000456775 1889 ntBASIC28.71■■■□□ 2.19
PSPC1Q8WXF1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
PSPC1Q8WXF1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.7■■■□□ 2.18
PSPC1Q8WXF1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.7■■■□□ 2.18
PSPC1Q8WXF1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PSPC1Q8WXF1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.69■■■□□ 2.18
PSPC1Q8WXF1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.69■■■□□ 2.18
PSPC1Q8WXF1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.69■■■□□ 2.18
PSPC1Q8WXF1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PSPC1Q8WXF1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PSPC1Q8WXF1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PSPC1Q8WXF1 MIR3648-2-201ENST00000581792 180 ntBASIC28.68■■■□□ 2.18
PSPC1Q8WXF1 MIR3648-1-201ENST00000615959 180 ntBASIC28.68■■■□□ 2.18
PSPC1Q8WXF1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PSPC1Q8WXF1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PSPC1Q8WXF1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.67■■■□□ 2.18
PSPC1Q8WXF1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.66■■■□□ 2.18
PSPC1Q8WXF1 CR559946.2-201ENST00000623684 991 ntBASIC28.65■■■□□ 2.18
PSPC1Q8WXF1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PSPC1Q8WXF1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PSPC1Q8WXF1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 DUX4L13-201ENST00000554103 1267 ntBASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 DUX4L15-201ENST00000611059 1267 ntBASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 DUX4L23-201ENST00000615195 1269 ntBASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 DUX4L24-201ENST00000617576 1269 ntBASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 DUX4L22-201ENST00000618238 1269 ntBASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 DUX4L20-201ENST00000619712 1269 ntBASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 DUX4L21-201ENST00000622058 1269 ntBASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 DUX4L10-201ENST00000622460 1267 ntBASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 DUX4L25-201ENST00000624915 1269 ntBASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.64■■■□□ 2.18
PSPC1Q8WXF1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
PSPC1Q8WXF1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PSPC1Q8WXF1 AC016575.1-201ENST00000607026 382 ntBASIC28.63■■■□□ 2.17
PSPC1Q8WXF1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PSPC1Q8WXF1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.62■■■□□ 2.17
PSPC1Q8WXF1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PSPC1Q8WXF1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
PSPC1Q8WXF1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.61■■■□□ 2.17
PSPC1Q8WXF1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PSPC1Q8WXF1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PSPC1Q8WXF1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PSPC1Q8WXF1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PSPC1Q8WXF1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PSPC1Q8WXF1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.6■■■□□ 2.17
PSPC1Q8WXF1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
PSPC1Q8WXF1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
PSPC1Q8WXF1 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.6■■■□□ 2.17
PSPC1Q8WXF1 ABCB10P1-201ENST00000614297 2181 ntBASIC28.6■■■□□ 2.17
PSPC1Q8WXF1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PSPC1Q8WXF1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.59■■■□□ 2.17
PSPC1Q8WXF1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PSPC1Q8WXF1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PSPC1Q8WXF1 MIR639-201ENST00000384974 98 ntBASIC28.58■■■□□ 2.17
PSPC1Q8WXF1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PSPC1Q8WXF1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
PSPC1Q8WXF1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PSPC1Q8WXF1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.57■■■□□ 2.16
PSPC1Q8WXF1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PSPC1Q8WXF1 AC135983.2-203ENST00000454486 1613 ntBASIC28.56■■■□□ 2.16
PSPC1Q8WXF1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PSPC1Q8WXF1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.55■■■□□ 2.16
PSPC1Q8WXF1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
PSPC1Q8WXF1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.54■■■□□ 2.16
PSPC1Q8WXF1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PSPC1Q8WXF1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PSPC1Q8WXF1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PSPC1Q8WXF1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
PSPC1Q8WXF1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
PSPC1Q8WXF1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PSPC1Q8WXF1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
PSPC1Q8WXF1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms