Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.98■■□□□ 1.11
CLDND2Q8NHS1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.98■■□□□ 1.11
CLDND2Q8NHS1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDND2Q8NHS1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLDND2Q8NHS1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.97■■□□□ 1.11
CLDND2Q8NHS1 LINC01971-201ENST00000617888 1048 ntBASIC21.97■■□□□ 1.11
CLDND2Q8NHS1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CLDND2Q8NHS1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDND2Q8NHS1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CLDND2Q8NHS1 DUX4L11-201ENST00000611504 1267 ntBASIC21.95■■□□□ 1.1
CLDND2Q8NHS1 DUX4L12-201ENST00000614593 1267 ntBASIC21.95■■□□□ 1.1
CLDND2Q8NHS1 DUX4L14-201ENST00000621227 1267 ntBASIC21.95■■□□□ 1.1
CLDND2Q8NHS1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDND2Q8NHS1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDND2Q8NHS1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDND2Q8NHS1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDND2Q8NHS1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.93■■□□□ 1.1
CLDND2Q8NHS1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLDND2Q8NHS1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.92■■□□□ 1.1
CLDND2Q8NHS1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.92■■□□□ 1.1
CLDND2Q8NHS1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.92■■□□□ 1.1
CLDND2Q8NHS1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.92■■□□□ 1.1
CLDND2Q8NHS1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.92■■□□□ 1.1
CLDND2Q8NHS1 MIR3648-2-201ENST00000581792 180 ntBASIC21.91■■□□□ 1.1
CLDND2Q8NHS1 AC016575.1-201ENST00000607026 382 ntBASIC21.91■■□□□ 1.1
CLDND2Q8NHS1 MIR3648-1-201ENST00000615959 180 ntBASIC21.91■■□□□ 1.1
CLDND2Q8NHS1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDND2Q8NHS1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDND2Q8NHS1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDND2Q8NHS1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.9■■□□□ 1.1
CLDND2Q8NHS1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.9■■□□□ 1.1
CLDND2Q8NHS1 AC139426.1-201ENST00000568218 2529 ntBASIC21.89■■□□□ 1.1
CLDND2Q8NHS1 MIR639-201ENST00000384974 98 ntBASIC21.89■■□□□ 1.09
CLDND2Q8NHS1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.89■■□□□ 1.09
CLDND2Q8NHS1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDND2Q8NHS1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDND2Q8NHS1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CLDND2Q8NHS1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDND2Q8NHS1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CLDND2Q8NHS1 CR559946.2-201ENST00000623684 991 ntBASIC21.87■■□□□ 1.09
CLDND2Q8NHS1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDND2Q8NHS1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDND2Q8NHS1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDND2Q8NHS1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.86■■□□□ 1.09
CLDND2Q8NHS1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDND2Q8NHS1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
CLDND2Q8NHS1 MIR4449-201ENST00000578365 66 ntBASIC21.85■■□□□ 1.09
CLDND2Q8NHS1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDND2Q8NHS1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.83■■□□□ 1.09
CLDND2Q8NHS1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLDND2Q8NHS1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDND2Q8NHS1 AC010864.1-201ENST00000609407 1511 ntBASIC21.82■■□□□ 1.08
CLDND2Q8NHS1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CLDND2Q8NHS1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDND2Q8NHS1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDND2Q8NHS1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDND2Q8NHS1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.8■■□□□ 1.08
CLDND2Q8NHS1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CLDND2Q8NHS1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLDND2Q8NHS1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDND2Q8NHS1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDND2Q8NHS1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDND2Q8NHS1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDND2Q8NHS1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 DUX4L13-201ENST00000554103 1267 ntBASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 DUX4L15-201ENST00000611059 1267 ntBASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 DUX4L23-201ENST00000615195 1269 ntBASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 DUX4L24-201ENST00000617576 1269 ntBASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 DUX4L22-201ENST00000618238 1269 ntBASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 DUX4L20-201ENST00000619712 1269 ntBASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 DUX4L21-201ENST00000622058 1269 ntBASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 DUX4L10-201ENST00000622460 1267 ntBASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 DUX4L25-201ENST00000624915 1269 ntBASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLDND2Q8NHS1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDND2Q8NHS1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLDND2Q8NHS1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CLDND2Q8NHS1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDND2Q8NHS1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDND2Q8NHS1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDND2Q8NHS1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDND2Q8NHS1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDND2Q8NHS1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDND2Q8NHS1 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CLDND2Q8NHS1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDND2Q8NHS1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDND2Q8NHS1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDND2Q8NHS1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDND2Q8NHS1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CLDND2Q8NHS1 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDND2Q8NHS1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDND2Q8NHS1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDND2Q8NHS1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDND2Q8NHS1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDND2Q8NHS1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDND2Q8NHS1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms