Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FNDC3BQ53EP0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
FNDC3BQ53EP0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.49■■□□□ 1.83
FNDC3BQ53EP0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FNDC3BQ53EP0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.48■■□□□ 1.83
FNDC3BQ53EP0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
FNDC3BQ53EP0 LINC00273-201ENST00000539813 1452 ntBASIC26.48■■□□□ 1.83
FNDC3BQ53EP0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
FNDC3BQ53EP0 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.47■■□□□ 1.83
FNDC3BQ53EP0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
FNDC3BQ53EP0 AL135925.1-201ENST00000605920 1701 ntBASIC26.46■■□□□ 1.83
FNDC3BQ53EP0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
FNDC3BQ53EP0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
FNDC3BQ53EP0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
FNDC3BQ53EP0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
FNDC3BQ53EP0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.45■■□□□ 1.82
FNDC3BQ53EP0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.45■■□□□ 1.82
FNDC3BQ53EP0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.45■■□□□ 1.82
FNDC3BQ53EP0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
FNDC3BQ53EP0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.45■■□□□ 1.82
FNDC3BQ53EP0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.44■■□□□ 1.82
FNDC3BQ53EP0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
FNDC3BQ53EP0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
FNDC3BQ53EP0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
FNDC3BQ53EP0 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.42■■□□□ 1.82
FNDC3BQ53EP0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
FNDC3BQ53EP0 AC127502.1-201ENST00000399971 1502 ntBASIC26.41■■□□□ 1.82
FNDC3BQ53EP0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
FNDC3BQ53EP0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
FNDC3BQ53EP0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.38■■□□□ 1.81
FNDC3BQ53EP0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
FNDC3BQ53EP0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.38■■□□□ 1.81
FNDC3BQ53EP0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
FNDC3BQ53EP0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.37■■□□□ 1.81
FNDC3BQ53EP0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
FNDC3BQ53EP0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
FNDC3BQ53EP0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FNDC3BQ53EP0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.36■■□□□ 1.81
FNDC3BQ53EP0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
FNDC3BQ53EP0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
FNDC3BQ53EP0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.35■■□□□ 1.81
FNDC3BQ53EP0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.34■■□□□ 1.81
FNDC3BQ53EP0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
FNDC3BQ53EP0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
FNDC3BQ53EP0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
FNDC3BQ53EP0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.33■■□□□ 1.81
FNDC3BQ53EP0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
FNDC3BQ53EP0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
FNDC3BQ53EP0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
FNDC3BQ53EP0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.31■■□□□ 1.8
FNDC3BQ53EP0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FNDC3BQ53EP0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.3■■□□□ 1.8
FNDC3BQ53EP0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.3■■□□□ 1.8
FNDC3BQ53EP0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.3■■□□□ 1.8
FNDC3BQ53EP0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
FNDC3BQ53EP0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
FNDC3BQ53EP0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
FNDC3BQ53EP0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
FNDC3BQ53EP0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
FNDC3BQ53EP0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
FNDC3BQ53EP0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
FNDC3BQ53EP0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
FNDC3BQ53EP0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
FNDC3BQ53EP0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
FNDC3BQ53EP0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.25■■□□□ 1.79
FNDC3BQ53EP0 AC135983.2-203ENST00000454486 1613 ntBASIC26.25■■□□□ 1.79
FNDC3BQ53EP0 WHAMMP2-203ENST00000563942 1603 ntBASIC26.25■■□□□ 1.79
FNDC3BQ53EP0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
FNDC3BQ53EP0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
FNDC3BQ53EP0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
FNDC3BQ53EP0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
FNDC3BQ53EP0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.23■■□□□ 1.79
FNDC3BQ53EP0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
FNDC3BQ53EP0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.23■■□□□ 1.79
FNDC3BQ53EP0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
FNDC3BQ53EP0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
FNDC3BQ53EP0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
FNDC3BQ53EP0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
FNDC3BQ53EP0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.2■■□□□ 1.78
FNDC3BQ53EP0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.2■■□□□ 1.78
FNDC3BQ53EP0 HSD17B1P1-201ENST00000590052 955 ntBASIC26.19■■□□□ 1.78
FNDC3BQ53EP0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
FNDC3BQ53EP0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
FNDC3BQ53EP0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
FNDC3BQ53EP0 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.18■■□□□ 1.78
FNDC3BQ53EP0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
FNDC3BQ53EP0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.17■■□□□ 1.78
FNDC3BQ53EP0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
FNDC3BQ53EP0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
FNDC3BQ53EP0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.17■■□□□ 1.78
FNDC3BQ53EP0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
FNDC3BQ53EP0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
FNDC3BQ53EP0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
FNDC3BQ53EP0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
FNDC3BQ53EP0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
FNDC3BQ53EP0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
FNDC3BQ53EP0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
FNDC3BQ53EP0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
FNDC3BQ53EP0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
FNDC3BQ53EP0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms