Protein–RNA interactions for Protein: Q07666

KHDRBS1, KH domain-containing, RNA-binding, signal transduction-associated protein 1, humanhuman

Known RBP eCLIP

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS1Q07666 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.99□□□□□ -1.612e-6■■■■□ 19.5
KHDRBS1Q07666 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.9□□□□□ -1.622e-6■■■■□ 19.5
KHDRBS1Q07666 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.11□□□□□ -1.752e-6■■■■□ 19.5
KHDRBS1Q07666 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.782e-6■■■■□ 19.5
KHDRBS1Q07666 MT-TP-201ENST00000387461 68 ntBASIC5.8□□□□□ -1.481e-323■■■■□ 19.5
KHDRBS1Q07666 FCGR2C-203ENST00000467903 1101 ntTSL 312.41□□□□□ -0.427e-13■■■■□ 19.4
KHDRBS1Q07666 FCGR2C-202ENST00000466542 1070 ntAPPRIS P5 TSL 1 (best) BASIC10.29□□□□□ -0.767e-13■■■■□ 19.4
KHDRBS1Q07666 FCGR2C-212ENST00000611236 958 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.887e-13■■■■□ 19.4
KHDRBS1Q07666 FCGR2C-211ENST00000543859 1507 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.987e-13■■■■□ 19.4
KHDRBS1Q07666 FCGR2C-209ENST00000507374 553 ntTSL 45.96□□□□□ -1.467e-13■■■■□ 19.4
KHDRBS1Q07666 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.96□□□□□ -1.467e-13■■■■□ 19.4
KHDRBS1Q07666 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.611e-6■■■■□ 19.4
KHDRBS1Q07666 ATP13A3-205ENST00000457986 490 ntTSL 320.75■□□□□ 0.912e-6■■■■□ 19.4
KHDRBS1Q07666 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.223e-6■■■■□ 19.4
KHDRBS1Q07666 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.133e-6■■■■□ 19.4
KHDRBS1Q07666 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.043e-6■■■■□ 19.4
KHDRBS1Q07666 ZHX1-C8orf76-202ENST00000622816 581 ntAPPRIS ALT2 TSL 414.39□□□□□ -0.113e-6■■■■□ 19.4
KHDRBS1Q07666 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.193e-6■■■■□ 19.4
KHDRBS1Q07666 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.73e-6■■■■□ 19.4
KHDRBS1Q07666 ATP13A3-204ENST00000446356 542 ntTSL 46.09□□□□□ -1.432e-6■■■■□ 19.4
KHDRBS1Q07666 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.782e-6■■■■□ 19.4
KHDRBS1Q07666 ZHX1-204ENST00000517516 780 ntTSL 32.93□□□□□ -1.943e-6■■■■□ 19.4
KHDRBS1Q07666 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.12e-6■■■■□ 19.4
KHDRBS1Q07666 SAMD5-202ENST00000566741 393 ntTSL 34.29□□□□□ -1.724e-6■■■■□ 19.3
KHDRBS1Q07666 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.32□□□□□ -1.884e-6■■■■□ 19.3
KHDRBS1Q07666 AL033504.1-202ENST00000432506 406 ntTSL 23.2□□□□□ -1.94e-6■■■■□ 19.3
KHDRBS1Q07666 AL033504.1-203ENST00000442094 404 ntTSL 32.19□□□□□ -2.064e-6■■■■□ 19.3
KHDRBS1Q07666 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC6.69□□□□□ -1.344e-6■■■■□ 19.3
KHDRBS1Q07666 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.254e-6■■■□□ 19.2
KHDRBS1Q07666 SMYD3-203ENST00000391836 732 ntTSL 59.17□□□□□ -0.944e-6■■■□□ 19.2
KHDRBS1Q07666 SMYD3-217ENST00000493441 823 ntTSL 28.25□□□□□ -1.094e-6■■■□□ 19.2
KHDRBS1Q07666 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.81□□□□□ -1.164e-6■■■□□ 19.2
KHDRBS1Q07666 SMYD3-216ENST00000492487 634 ntTSL 37.35□□□□□ -1.234e-6■■■□□ 19.2
KHDRBS1Q07666 SMYD3-213ENST00000488153 653 ntTSL 34.66□□□□□ -1.664e-6■■■□□ 19.2
KHDRBS1Q07666 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.09□□□□□ -1.591e-6■■■□□ 19.2
KHDRBS1Q07666 HIST1H3D-203ENST00000635641 1637 ntTSL 515.91■□□□□ 0.141e-7■■■□□ 19.1
KHDRBS1Q07666 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.211e-7■■■□□ 19.1
KHDRBS1Q07666 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.095e-6■■■□□ 19.1
KHDRBS1Q07666 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.335e-6■■■□□ 19.1
KHDRBS1Q07666 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.29□□□□□ -0.445e-6■■■□□ 19.1
KHDRBS1Q07666 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC10.67□□□□□ -0.75e-6■■■□□ 19.1
KHDRBS1Q07666 HERC1-214ENST00000561400 2215 ntTSL 210.22□□□□□ -0.775e-6■■■□□ 19.1
KHDRBS1Q07666 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.815e-6■■■□□ 19.1
KHDRBS1Q07666 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.835e-6■■■□□ 19.1
KHDRBS1Q07666 RAPGEF6-214ENST00000515170 4103 ntTSL 29.34□□□□□ -0.915e-6■■■□□ 19.1
KHDRBS1Q07666 HERC1-209ENST00000560519 591 ntTSL 37.87□□□□□ -1.155e-6■■■□□ 19.1
KHDRBS1Q07666 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.285e-6■■■□□ 19.1
KHDRBS1Q07666 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.615e-6■■■□□ 19.1
KHDRBS1Q07666 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.615e-6■■■□□ 19.1
KHDRBS1Q07666 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.735e-6■■■□□ 19.1
KHDRBS1Q07666 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.95e-6■■■□□ 19.1
KHDRBS1Q07666 RAPGEF6-203ENST00000503398 149 ntTSL 51.62□□□□□ -2.155e-6■■■□□ 19.1
KHDRBS1Q07666 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.49□□□□□ -0.254e-6■■■□□ 19
KHDRBS1Q07666 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.294e-6■■■□□ 19
KHDRBS1Q07666 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.91□□□□□ -0.344e-6■■■□□ 19
KHDRBS1Q07666 ACADM-215ENST00000532509 825 ntTSL 512.64□□□□□ -0.394e-6■■■□□ 19
KHDRBS1Q07666 ACADM-213ENST00000530953 508 ntTSL 511.96□□□□□ -0.494e-6■■■□□ 19
KHDRBS1Q07666 ACADM-208ENST00000526129 1536 ntTSL 210.65□□□□□ -0.74e-6■■■□□ 19
KHDRBS1Q07666 ACADM-217ENST00000534334 1149 ntTSL 1 (best)6.97□□□□□ -1.294e-6■■■□□ 19
KHDRBS1Q07666 ACADM-212ENST00000529059 1357 ntTSL 24.57□□□□□ -1.684e-6■■■□□ 19
KHDRBS1Q07666 ACADM-206ENST00000525808 1422 ntTSL 24.53□□□□□ -1.684e-6■■■□□ 19
KHDRBS1Q07666 ACADM-209ENST00000526196 1451 ntTSL 1 (best)4.02□□□□□ -1.774e-6■■■□□ 19
KHDRBS1Q07666 ACADM-210ENST00000526930 581 ntTSL 33.94□□□□□ -1.784e-6■■■□□ 19
KHDRBS1Q07666 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.794e-6■■■□□ 19
KHDRBS1Q07666 VAPA-205ENST00000578314 532 ntTSL 319.5■□□□□ 0.713e-6■■■□□ 19
KHDRBS1Q07666 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.153e-6■■■□□ 19
KHDRBS1Q07666 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.23e-6■■■□□ 19
KHDRBS1Q07666 VAPA-204ENST00000577901 917 ntTSL 213.73□□□□□ -0.213e-6■■■□□ 19
KHDRBS1Q07666 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.283e-6■■■□□ 19
KHDRBS1Q07666 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.283e-6■■■□□ 19
KHDRBS1Q07666 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.21□□□□□ -0.293e-6■■■□□ 19
KHDRBS1Q07666 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.9□□□□□ -0.343e-6■■■□□ 19
KHDRBS1Q07666 VAPA-209ENST00000585042 567 ntTSL 412.44□□□□□ -0.423e-6■■■□□ 19
KHDRBS1Q07666 PSMD14-202ENST00000437630 577 ntTSL 58.76□□□□□ -1.013e-6■■■□□ 19
KHDRBS1Q07666 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.664e-7■■■□□ 19
KHDRBS1Q07666 XPOT-206ENST00000542958 1321 ntTSL 53.71□□□□□ -1.813e-6■■■□□ 19
KHDRBS1Q07666 VAPA-208ENST00000584796 654 ntTSL 32.55□□□□□ -23e-6■■■□□ 19
KHDRBS1Q07666 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.628e-11■■■□□ 19
KHDRBS1Q07666 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.28e-11■■■□□ 19
KHDRBS1Q07666 TAF15-203ENST00000603393 1214 ntTSL 1 (best)15.25■□□□□ 0.038e-11■■■□□ 19
KHDRBS1Q07666 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.128e-11■■■□□ 19
KHDRBS1Q07666 TAF15-212ENST00000604879 808 ntTSL 512.09□□□□□ -0.478e-11■■■□□ 19
KHDRBS1Q07666 TAF15-201ENST00000603067 580 ntTSL 57.65□□□□□ -1.188e-11■■■□□ 19
KHDRBS1Q07666 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.87□□□□□ -0.192e-6■■■□□ 19
KHDRBS1Q07666 MKRN3-204ENST00000568945 2740 ntTSL 49.66□□□□□ -0.862e-6■■■□□ 19
KHDRBS1Q07666 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.895e-6■■■□□ 18.6
KHDRBS1Q07666 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.41■■□□□ 1.825e-6■■■□□ 18.6
KHDRBS1Q07666 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.39■■□□□ 1.825e-6■■■□□ 18.6
KHDRBS1Q07666 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.39■■□□□ 1.825e-6■■■□□ 18.6
KHDRBS1Q07666 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.24■■□□□ 1.155e-6■■■□□ 18.6
KHDRBS1Q07666 ST7-215ENST00000438863 1005 ntTSL 522.18■■□□□ 1.145e-6■■■□□ 18.6
KHDRBS1Q07666 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.15■■□□□ 1.145e-6■■■□□ 18.6
KHDRBS1Q07666 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.8■■□□□ 1.085e-6■■■□□ 18.6
KHDRBS1Q07666 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.07■□□□□ 0.85e-6■■■□□ 18.6
KHDRBS1Q07666 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.465e-6■■■□□ 18.6
KHDRBS1Q07666 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.025e-6■■■□□ 18.6
KHDRBS1Q07666 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.93□□□□□ -0.345e-6■■■□□ 18.6
KHDRBS1Q07666 ST7-226ENST00000487459 1681 ntTSL 512.58□□□□□ -0.45e-6■■■□□ 18.6
KHDRBS1Q07666 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.445e-6■■■□□ 18.6
KHDRBS1Q07666 MEIS2-202ENST00000338564 4829 ntTSL 1 (best) BASIC10.8□□□□□ -0.685e-6■■■□□ 18.6
Retrieved 100 of 2,417 protein–RNA pairs in 256 ms