RNA–Protein interactions for RNA: ENST00000508479.5

SEC31A-226, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC31A, Length 3,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-226ENST00000508479 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
SEC31A-226ENST00000508479 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
SEC31A-226ENST00000508479 ABCC9O60706 1549 aa11.48□□□□□ -0.57
SEC31A-226ENST00000508479 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
SEC31A-226ENST00000508479 ZCCHC6Q5VYS8 1495 aaKnown RBP11.13□□□□□ -0.63
SEC31A-226ENST00000508479 NACADO15069 1562 aa10.97□□□□□ -0.65
SEC31A-226ENST00000508479 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
SEC31A-226ENST00000508479 DCAF1Q9Y4B6 1507 aa10.92□□□□□ -0.66
SEC31A-226ENST00000508479 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
SEC31A-226ENST00000508479 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
SEC31A-226ENST00000508479 SCRIBQ14160 1630 aa10.86□□□□□ -0.67
SEC31A-226ENST00000508479 PABPN1Q86U42 306 aaKnown RBP eCLIP10.82□□□□□ -0.68
SEC31A-226ENST00000508479 UNC13AQ9UPW8 1703 aa10.8□□□□□ -0.68
SEC31A-226ENST00000508479 BICRAQ9NZM4 1560 aa10.69□□□□□ -0.7
SEC31A-226ENST00000508479 CECR2Q9BXF3 1484 aa10.47□□□□□ -0.73
SEC31A-226ENST00000508479 DNAJC5BQ9UF47 199 aa10.43□□□□□ -0.74
SEC31A-226ENST00000508479 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
SEC31A-226ENST00000508479 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
SEC31A-226ENST00000508479 CC2D2AQ9P2K1 1620 aa10.33□□□□□ -0.76
SEC31A-226ENST00000508479 SMARCA4P51532 1647 aa10.32□□□□□ -0.76
SEC31A-226ENST00000508479 SUPT5HO00267 1087 aaKnown RBP10.31□□□□□ -0.76
SEC31A-226ENST00000508479 BAZ1AQ9NRL2 1556 aaPredicted RBP10.29□□□□□ -0.76
SEC31A-226ENST00000508479 RSF1Q96T23 1441 aaPredicted RBP10.27□□□□□ -0.77
SEC31A-226ENST00000508479 WIZO95785 1651 aa10.26□□□□□ -0.77
SEC31A-226ENST00000508479 ATAD2BQ9ULI0 1458 aa10.22□□□□□ -0.77
SEC31A-226ENST00000508479 SMARCA2P51531 1590 aa10.17□□□□□ -0.78
SEC31A-226ENST00000508479 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
SEC31A-226ENST00000508479 NCAPD3P42695 1498 aa10.14□□□□□ -0.79
SEC31A-226ENST00000508479 PEG3Q9GZU2 1588 aa10.13□□□□□ -0.79
SEC31A-226ENST00000508479 HMGXB3Q12766 1538 aa10.08□□□□□ -0.8
SEC31A-226ENST00000508479 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
SEC31A-226ENST00000508479 CCDC88BA6NC98 1476 aa10.01□□□□□ -0.81
SEC31A-226ENST00000508479 NESP48681 1621 aa10□□□□□ -0.81
SEC31A-226ENST00000508479 CADPSQ9ULU8 1353 aa9.9□□□□□ -0.83
SEC31A-226ENST00000508479 CFTRP13569 1480 aa9.86□□□□□ -0.83
SEC31A-226ENST00000508479 ERCC6Q03468 1493 aa9.84□□□□□ -0.83
SEC31A-226ENST00000508479 LAMC3Q9Y6N6 1575 aa9.84□□□□□ -0.83
SEC31A-226ENST00000508479 KIF21AQ7Z4S6 1674 aa9.83□□□□□ -0.84
SEC31A-226ENST00000508479 FANCD2Q9BXW9 1451 aa9.81□□□□□ -0.84
SEC31A-226ENST00000508479 PDS5BQ9NTI5 1447 aa9.79□□□□□ -0.84
SEC31A-226ENST00000508479 ABCC8Q09428 1581 aa9.77□□□□□ -0.84
SEC31A-226ENST00000508479 CEP164Q9UPV0 1460 aa9.77□□□□□ -0.85
SEC31A-226ENST00000508479 PRDM2Q13029 1718 aa9.76□□□□□ -0.85
SEC31A-226ENST00000508479 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
SEC31A-226ENST00000508479 THOC2Q8NI27 1593 aaKnown RBP9.7□□□□□ -0.86
SEC31A-226ENST00000508479 MRC2Q9UBG0 1479 aa9.7□□□□□ -0.86
SEC31A-226ENST00000508479 CUX1P39880 1505 aa9.68□□□□□ -0.86
SEC31A-226ENST00000508479 WRNQ14191 1432 aaPredicted RBP eCLIP9.67□□□□□ -0.86
SEC31A-226ENST00000508479 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
SEC31A-226ENST00000508479 TOPBP1Q92547 1522 aa9.66□□□□□ -0.86
SEC31A-226ENST00000508479 TRIM41Q8WV44 630 aa9.64□□□□□ -0.87
SEC31A-226ENST00000508479 WDR62O43379 1518 aa9.64□□□□□ -0.87
SEC31A-226ENST00000508479 CHIC1Q5VXU3 224 aa9.63□□□□□ -0.87
SEC31A-226ENST00000508479 DNMBPQ6XZF7 1577 aa9.63□□□□□ -0.87
SEC31A-226ENST00000508479 RAD54L2Q9Y4B4 1467 aa9.63□□□□□ -0.87
SEC31A-226ENST00000508479 FGD5Q6ZNL6 1462 aa9.62□□□□□ -0.87
SEC31A-226ENST00000508479 POLA1P09884 1462 aaPredicted RBP9.61□□□□□ -0.87
SEC31A-226ENST00000508479 CUX2O14529 1486 aa9.59□□□□□ -0.87
SEC31A-226ENST00000508479 TOP2BQ02880 1626 aa9.59□□□□□ -0.87
SEC31A-226ENST00000508479 SOGA1O94964 1423 aa9.58□□□□□ -0.88
SEC31A-226ENST00000508479 BIVM-ERCC5R4GMW8 1640 aa9.57□□□□□ -0.88
SEC31A-226ENST00000508479 ZNF608Q9ULD9 1512 aaPredicted RBP9.57□□□□□ -0.88
SEC31A-226ENST00000508479 FAM9AQ8IZU1 332 aaPredicted RBP9.57□□□□□ -0.88
SEC31A-226ENST00000508479 TDRD9Q8NDG6 1382 aaKnown RBP9.57□□□□□ -0.88
SEC31A-226ENST00000508479 AQRO60306 1485 aaKnown RBP eCLIP9.55□□□□□ -0.887e-7■■■■□ 21.5
SEC31A-226ENST00000508479 EHMT2Q96KQ7 1210 aa9.54□□□□□ -0.88
SEC31A-226ENST00000508479 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
SEC31A-226ENST00000508479 RUSC2Q8N2Y8 1516 aa9.53□□□□□ -0.88
SEC31A-226ENST00000508479 IFT140Q96RY7 1462 aa9.51□□□□□ -0.89
SEC31A-226ENST00000508479 EIF4G3O43432 1585 aaKnown RBP9.48□□□□□ -0.89
SEC31A-226ENST00000508479 WDR97A6NE52 1622 aa9.47□□□□□ -0.89
SEC31A-226ENST00000508479 ABCA10Q8WWZ4 1543 aa9.47□□□□□ -0.89
SEC31A-226ENST00000508479 FBLN2P98095 1184 aa9.47□□□□□ -0.89
SEC31A-226ENST00000508479 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.9
SEC31A-226ENST00000508479 ABCA5Q8WWZ7 1642 aa9.43□□□□□ -0.9
SEC31A-226ENST00000508479 KIF27Q86VH2 1401 aa9.43□□□□□ -0.9
SEC31A-226ENST00000508479 SNAPC4Q5SXM2 1469 aa9.42□□□□□ -0.9
SEC31A-226ENST00000508479 PBRM1Q86U86 1689 aa9.42□□□□□ -0.9
SEC31A-226ENST00000508479 GRIN2BQ13224 1484 aa9.4□□□□□ -0.9
SEC31A-226ENST00000508479 IGF1RP08069 1367 aa9.4□□□□□ -0.9
SEC31A-226ENST00000508479 CHMP7Q8WUX9 453 aaPredicted RBP9.38□□□□□ -0.91
SEC31A-226ENST00000508479 CSRNP3Q8WYN3 585 aa9.38□□□□□ -0.91
SEC31A-226ENST00000508479 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
SEC31A-226ENST00000508479 CARMIL1Q5VZK9 1371 aa9.35□□□□□ -0.91
SEC31A-226ENST00000508479 CHD1O14646 1710 aa9.35□□□□□ -0.91
SEC31A-226ENST00000508479 LOC105371045A0A1W2PR82 267 aa9.35□□□□□ -0.91
SEC31A-226ENST00000508479 ERICH3Q5RHP9 1530 aa9.34□□□□□ -0.91
SEC31A-226ENST00000508479 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
SEC31A-226ENST00000508479 MAGI1Q96QZ7 1491 aaPredicted RBP9.33□□□□□ -0.92
SEC31A-226ENST00000508479 RAPGEF2Q9Y4G8 1499 aa9.32□□□□□ -0.92
SEC31A-226ENST00000508479 FHAD1B1AJZ9 1412 aa9.32□□□□□ -0.92
SEC31A-226ENST00000508479 SYNJ2O15056 1496 aa9.32□□□□□ -0.92
SEC31A-226ENST00000508479 GRIN2AQ12879 1464 aa9.3□□□□□ -0.92
SEC31A-226ENST00000508479 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
SEC31A-226ENST00000508479 CUL7Q14999 1698 aa9.29□□□□□ -0.92
SEC31A-226ENST00000508479 EEA1Q15075 1411 aa9.29□□□□□ -0.92
SEC31A-226ENST00000508479 OSCARQ8IYS5 282 aa9.29□□□□□ -0.92
SEC31A-226ENST00000508479 PRXQ9BXM0 1461 aa9.28□□□□□ -0.92
SEC31A-226ENST00000508479 TTBK1Q5TCY1 1321 aaPredicted RBP9.28□□□□□ -0.92
SEC31A-226ENST00000508479 CEP170Q5SW79 1584 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms