RNA–Protein interactions for RNA: ENST00000568252.1

MKRN3-203, Transcript of makorin ring finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene MKRN3, Length 1,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN3-203ENST00000568252 NISCHQ9Y2I1 1504 aa39.3■■■■□ 3.88
MKRN3-203ENST00000568252 CCDC180Q9P1Z9 1646 aa34.98■■■■□ 3.19
MKRN3-203ENST00000568252 ABCC9O60706 1549 aa34.27■■■■□ 3.08
MKRN3-203ENST00000568252 AEBP2Q6ZN18 517 aaPredicted RBP33.54■■■□□ 2.96
MKRN3-203ENST00000568252 RB1CC1Q8TDY2 1594 aa32.94■■■□□ 2.86
MKRN3-203ENST00000568252 NACADO15069 1562 aa32.88■■■□□ 2.85
MKRN3-203ENST00000568252 DCAF8L2P0C7V8 631 aa32.83■■■□□ 2.85
MKRN3-203ENST00000568252 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
MKRN3-203ENST00000568252 MYO15BQ96JP2 1530 aa32.66■■■□□ 2.82
MKRN3-203ENST00000568252 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.79
MKRN3-203ENST00000568252 UNC13AQ9UPW8 1703 aa32.25■■■□□ 2.75
MKRN3-203ENST00000568252 PABPN1Q86U42 306 aaKnown RBP eCLIP32■■■□□ 2.71
MKRN3-203ENST00000568252 BICRAQ9NZM4 1560 aa31.97■■■□□ 2.71
MKRN3-203ENST00000568252 SCRIBQ14160 1630 aa31.92■■■□□ 2.7
MKRN3-203ENST00000568252 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
MKRN3-203ENST00000568252 DNAJC5BQ9UF47 199 aa31.5■■■□□ 2.63
MKRN3-203ENST00000568252 CHIC1Q5VXU3 224 aa31.24■■■□□ 2.59
MKRN3-203ENST00000568252 EIF4G1Q04637 1599 aaKnown RBP31.12■■■□□ 2.57
MKRN3-203ENST00000568252 CC2D2AQ9P2K1 1620 aa31.01■■■□□ 2.55
MKRN3-203ENST00000568252 CECR2Q9BXF3 1484 aa30.78■■■□□ 2.52
MKRN3-203ENST00000568252 SMARCA4P51532 1647 aa30.52■■■□□ 2.48
MKRN3-203ENST00000568252 BAZ1AQ9NRL2 1556 aaPredicted RBP30.47■■■□□ 2.47
MKRN3-203ENST00000568252 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
MKRN3-203ENST00000568252 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
MKRN3-203ENST00000568252 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
MKRN3-203ENST00000568252 MROH2BQ7Z745 1585 aa30.3■■■□□ 2.44
MKRN3-203ENST00000568252 PEG3Q9GZU2 1588 aa30.22■■■□□ 2.43
MKRN3-203ENST00000568252 HMGXB3Q12766 1538 aa30.19■■■□□ 2.42
MKRN3-203ENST00000568252 BAZ1BQ9UIG0 1483 aaKnown RBP30.1■■■□□ 2.41
MKRN3-203ENST00000568252 WIZO95785 1651 aa29.99■■■□□ 2.39
MKRN3-203ENST00000568252 RSF1Q96T23 1441 aaPredicted RBP29.92■■■□□ 2.38
MKRN3-203ENST00000568252 NESP48681 1621 aa29.65■■■□□ 2.34
MKRN3-203ENST00000568252 TOP2AP11388 1531 aaKnown RBP29.65■■■□□ 2.34
MKRN3-203ENST00000568252 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
MKRN3-203ENST00000568252 ERCC6Q03468 1493 aa29.52■■■□□ 2.32
MKRN3-203ENST00000568252 CADPSQ9ULU8 1353 aa29.45■■■□□ 2.3
MKRN3-203ENST00000568252 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
MKRN3-203ENST00000568252 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
MKRN3-203ENST00000568252 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
MKRN3-203ENST00000568252 CFTRP13569 1480 aa29.27■■■□□ 2.28
MKRN3-203ENST00000568252 CUX2O14529 1486 aa29.24■■■□□ 2.27
MKRN3-203ENST00000568252 THOC2Q8NI27 1593 aaKnown RBP29.23■■■□□ 2.27
MKRN3-203ENST00000568252 FANCD2Q9BXW9 1451 aa29.12■■■□□ 2.25
MKRN3-203ENST00000568252 SUPT5HO00267 1087 aaKnown RBP29.1■■■□□ 2.25
MKRN3-203ENST00000568252 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
MKRN3-203ENST00000568252 CEP164Q9UPV0 1460 aa29.09■■■□□ 2.25
MKRN3-203ENST00000568252 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
MKRN3-203ENST00000568252 WDR62O43379 1518 aa28.98■■■□□ 2.23
MKRN3-203ENST00000568252 URB2Q14146 1524 aaKnown RBP28.85■■■□□ 2.21
MKRN3-203ENST00000568252 TOPBP1Q92547 1522 aa28.66■■■□□ 2.18
MKRN3-203ENST00000568252 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
MKRN3-203ENST00000568252 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
MKRN3-203ENST00000568252 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
MKRN3-203ENST00000568252 IFT140Q96RY7 1462 aa28.47■■■□□ 2.15
MKRN3-203ENST00000568252 CUX1P39880 1505 aa28.43■■■□□ 2.14
MKRN3-203ENST00000568252 POLA1P09884 1462 aaPredicted RBP28.41■■■□□ 2.14
MKRN3-203ENST00000568252 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.13
MKRN3-203ENST00000568252 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
MKRN3-203ENST00000568252 TARBP1Q13395 1621 aaKnown RBP28.36■■■□□ 2.13
MKRN3-203ENST00000568252 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
MKRN3-203ENST00000568252 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
MKRN3-203ENST00000568252 SOGA1O94964 1423 aa28.27■■■□□ 2.12
MKRN3-203ENST00000568252 EIF4G3O43432 1585 aaKnown RBP28.27■■■□□ 2.12
MKRN3-203ENST00000568252 WRNQ14191 1432 aaPredicted RBP eCLIP28.21■■■□□ 2.11
MKRN3-203ENST00000568252 AQRO60306 1485 aaKnown RBP eCLIP28.2■■■□□ 2.1
MKRN3-203ENST00000568252 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
MKRN3-203ENST00000568252 SYNJ1O43426 1573 aa28.18■■■□□ 2.1
MKRN3-203ENST00000568252 TOP2BQ02880 1626 aa28.17■■■□□ 2.1
MKRN3-203ENST00000568252 PHF23Q9BUL5 403 aaPredicted RBP28.15■■■□□ 2.1
MKRN3-203ENST00000568252 WDR97A6NE52 1622 aa28.13■■■□□ 2.09
MKRN3-203ENST00000568252 TDRD9Q8NDG6 1382 aaKnown RBP28.12■■■□□ 2.09
MKRN3-203ENST00000568252 ABCA10Q8WWZ4 1543 aa28.05■■■□□ 2.08
MKRN3-203ENST00000568252 OSCARQ8IYS5 282 aa27.99■■■□□ 2.07
MKRN3-203ENST00000568252 ABCA5Q8WWZ7 1642 aa27.97■■■□□ 2.07
MKRN3-203ENST00000568252 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
MKRN3-203ENST00000568252 GRIN2BQ13224 1484 aa27.95■■■□□ 2.06
MKRN3-203ENST00000568252 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
MKRN3-203ENST00000568252 SNAPC4Q5SXM2 1469 aa27.94■■■□□ 2.06
MKRN3-203ENST00000568252 CHD1O14646 1710 aa27.94■■■□□ 2.06
MKRN3-203ENST00000568252 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.06
MKRN3-203ENST00000568252 FBLN2P98095 1184 aa27.84■■■□□ 2.05
MKRN3-203ENST00000568252 SYNJ2O15056 1496 aa27.78■■■□□ 2.04
MKRN3-203ENST00000568252 CHMP7Q8WUX9 453 aaPredicted RBP27.75■■■□□ 2.03
MKRN3-203ENST00000568252 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
MKRN3-203ENST00000568252 ADAMTS12P58397 1594 aa27.7■■■□□ 2.02
MKRN3-203ENST00000568252 FHAD1B1AJZ9 1412 aa27.62■■■□□ 2.01
MKRN3-203ENST00000568252 CLASP1Q7Z460 1538 aa27.62■■■□□ 2.01
MKRN3-203ENST00000568252 KIF27Q86VH2 1401 aa27.61■■■□□ 2.01
MKRN3-203ENST00000568252 GRIN2AQ12879 1464 aa27.61■■■□□ 2.01
MKRN3-203ENST00000568252 RIMBP3CA6NJZ7 1639 aa27.6■■■□□ 2.01
MKRN3-203ENST00000568252 RIMBP3BA6NNM3 1639 aa27.6■■■□□ 2.01
MKRN3-203ENST00000568252 RIMBP3Q9UFD9 1639 aa27.6■■■□□ 2.01
MKRN3-203ENST00000568252 ARHGEF11O15085 1522 aa27.58■■■□□ 2.01
MKRN3-203ENST00000568252 IGF1RP08069 1367 aa27.51■■□□□ 1.99
MKRN3-203ENST00000568252 CEP170Q5SW79 1584 aa27.49■■□□□ 1.99
MKRN3-203ENST00000568252 NUP160Q12769 1436 aa27.48■■□□□ 1.99
MKRN3-203ENST00000568252 TRIM41Q8WV44 630 aa27.48■■□□□ 1.99
MKRN3-203ENST00000568252 CUL7Q14999 1698 aa27.46■■□□□ 1.99
MKRN3-203ENST00000568252 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.97
MKRN3-203ENST00000568252 ARAP1Q96P48 1450 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms