RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 AEBP2Q6ZN18 517 aaPredicted RBP32.97■■■□□ 2.87
ATP13A3-204ENST00000446356 CHIC1Q5VXU3 224 aa32.2■■■□□ 2.75
ATP13A3-204ENST00000446356 PHF23Q9BUL5 403 aaPredicted RBP28.23■■■□□ 2.11
ATP13A3-204ENST00000446356 SENP3Q9H4L4 574 aaPredicted RBP28.15■■■□□ 2.1
ATP13A3-204ENST00000446356 PLPPR3Q6T4P5 718 aa26.19■■□□□ 1.78
ATP13A3-204ENST00000446356 FOXD1Q16676 465 aa26.02■■□□□ 1.76
ATP13A3-204ENST00000446356 ADRA2BP18089 450 aa24.95■■□□□ 1.58
ATP13A3-204ENST00000446356 PPP6R1Q9UPN7 881 aa24.93■■□□□ 1.58
ATP13A3-204ENST00000446356 PIAS4Q8N2W9 510 aaPredicted RBP24.62■■□□□ 1.53
ATP13A3-204ENST00000446356 MSH5O43196 834 aa24.35■■□□□ 1.49
ATP13A3-204ENST00000446356 POTEDQ86YR6 584 aa24.06■■□□□ 1.44
ATP13A3-204ENST00000446356 PPP4R3CPQ6ZMV5 832 aa23.02■■□□□ 1.28
ATP13A3-204ENST00000446356 SCAF1Q9H7N4 1312 aaKnown RBP22.99■■□□□ 1.27
ATP13A3-204ENST00000446356 MAPK8IP2Q13387 824 aaPredicted RBP22.63■■□□□ 1.21
ATP13A3-204ENST00000446356 NCBP3Q53F19 620 aaKnown RBP22.5■■□□□ 1.19
ATP13A3-204ENST00000446356 CNKSR2Q8WXI2 1034 aa22.42■■□□□ 1.18
ATP13A3-204ENST00000446356 DMRT2Q9Y5R5 561 aa22.4■■□□□ 1.18
ATP13A3-204ENST00000446356 KCNA4P22459 653 aa22.36■■□□□ 1.17
ATP13A3-204ENST00000446356 NPM3O75607 178 aaKnown RBP22.04■■□□□ 1.12
ATP13A3-204ENST00000446356 RNF216Q9NWF9 866 aaPredicted RBP21.99■■□□□ 1.11
ATP13A3-204ENST00000446356 HOXD11P31277 338 aaPredicted RBP21.89■■□□□ 1.09
ATP13A3-204ENST00000446356 DCAF8L1A6NGE4 600 aa21.54■■□□□ 1.04
ATP13A3-204ENST00000446356 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
ATP13A3-204ENST00000446356 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
ATP13A3-204ENST00000446356 CACNB1Q02641 598 aaPredicted RBP20.96■□□□□ 0.95
ATP13A3-204ENST00000446356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.953e-8■□□□□ 10.7
ATP13A3-204ENST00000446356 SLC4A2P04920 1241 aa20.78■□□□□ 0.92
ATP13A3-204ENST00000446356 RNF39Q9H2S5 420 aa20.77■□□□□ 0.92
ATP13A3-204ENST00000446356 FOXD4L1Q9NU39 408 aa20.68■□□□□ 0.9
ATP13A3-204ENST00000446356 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
ATP13A3-204ENST00000446356 ZBTB22O15209 634 aa20.51■□□□□ 0.87
ATP13A3-204ENST00000446356 U3KPZ7 1027 aaPredicted RBP20.51■□□□□ 0.87
ATP13A3-204ENST00000446356 MYCNP04198 464 aaPredicted RBP20.45■□□□□ 0.86
ATP13A3-204ENST00000446356 C1QBPQ07021 282 aaKnown RBP20.45■□□□□ 0.86
ATP13A3-204ENST00000446356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.38■□□□□ 0.85
ATP13A3-204ENST00000446356 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
ATP13A3-204ENST00000446356 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
ATP13A3-204ENST00000446356 SAMD1Q6SPF0 538 aaPredicted RBP20.27■□□□□ 0.84
ATP13A3-204ENST00000446356 APLP2Q06481 763 aa20.23■□□□□ 0.83
ATP13A3-204ENST00000446356 CAPN15O75808 1086 aa19.98■□□□□ 0.79
ATP13A3-204ENST00000446356 ATXN8OSP0DMR3 200 aa19.97■□□□□ 0.79
ATP13A3-204ENST00000446356 SPINK5Q9NQ38 1064 aaPredicted RBP19.95■□□□□ 0.78
ATP13A3-204ENST00000446356 ZNF219Q9P2Y4 722 aaPredicted RBP19.89■□□□□ 0.77
ATP13A3-204ENST00000446356 TRHP20396 242 aaPredicted RBP19.85■□□□□ 0.77
ATP13A3-204ENST00000446356 ATF5Q9Y2D1 282 aaPredicted RBP19.77■□□□□ 0.76
ATP13A3-204ENST00000446356 DSG3P32926 999 aa19.58■□□□□ 0.72
ATP13A3-204ENST00000446356 ABCB7O75027 752 aa19.55■□□□□ 0.72
ATP13A3-204ENST00000446356 POLA2Q14181 598 aa19.48■□□□□ 0.71
ATP13A3-204ENST00000446356 ZBTB12Q9Y330 459 aaPredicted RBP19.26■□□□□ 0.67
ATP13A3-204ENST00000446356 FBLN2P98095 1184 aa19.14■□□□□ 0.65
ATP13A3-204ENST00000446356 MKRN4PQ13434 485 aaPredicted RBP18.91■□□□□ 0.62
ATP13A3-204ENST00000446356 OSCARQ8IYS5 282 aa18.83■□□□□ 0.6
ATP13A3-204ENST00000446356 POTEHQ6S545 545 aa18.81■□□□□ 0.6
ATP13A3-204ENST00000446356 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
ATP13A3-204ENST00000446356 SPDYE2BA6NHP3 402 aa18.67■□□□□ 0.58
ATP13A3-204ENST00000446356 SPDYE6P0CI01 402 aa18.67■□□□□ 0.58
ATP13A3-204ENST00000446356 SPDYE2Q495Y8 402 aa18.67■□□□□ 0.58
ATP13A3-204ENST00000446356 ZNF692Q9BU19 519 aaPredicted RBP18.59■□□□□ 0.57
ATP13A3-204ENST00000446356 SPDYE4A6NLX3 237 aa18.56■□□□□ 0.56
ATP13A3-204ENST00000446356 FKBP8Q14318 412 aa18.5■□□□□ 0.55
ATP13A3-204ENST00000446356 AKT1S1Q96B36 256 aa18.48■□□□□ 0.55
ATP13A3-204ENST00000446356 SSUH2Q9Y2M2 353 aa18.46■□□□□ 0.55
ATP13A3-204ENST00000446356 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
ATP13A3-204ENST00000446356 REM2Q8IYK8 340 aaPredicted RBP18.26■□□□□ 0.51
ATP13A3-204ENST00000446356 PROM2Q8N271 834 aa18.16■□□□□ 0.5
ATP13A3-204ENST00000446356 SPDYE1Q8NFV5 336 aaPredicted RBP18.16■□□□□ 0.5
ATP13A3-204ENST00000446356 CHRDL2Q6WN34 429 aa18.15■□□□□ 0.5
ATP13A3-204ENST00000446356 CLEC11AQ9Y240 323 aa18.08■□□□□ 0.48
ATP13A3-204ENST00000446356 STAG3Q9UJ98 1225 aa18.07■□□□□ 0.48
ATP13A3-204ENST00000446356 PITPNM1O00562 1244 aa18.05■□□□□ 0.48
ATP13A3-204ENST00000446356 FBXO3Q9UK99 471 aa17.94■□□□□ 0.46
ATP13A3-204ENST00000446356 PRR29P0C7W0 189 aa17.9■□□□□ 0.46
ATP13A3-204ENST00000446356 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATP13A3-204ENST00000446356 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
ATP13A3-204ENST00000446356 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
ATP13A3-204ENST00000446356 MIER1Q8N108 512 aa17.64■□□□□ 0.41
ATP13A3-204ENST00000446356 PLCD3Q8N3E9 789 aa17.64■□□□□ 0.41
ATP13A3-204ENST00000446356 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
ATP13A3-204ENST00000446356 VASPP50552 380 aaPredicted RBP17.62■□□□□ 0.41
ATP13A3-204ENST00000446356 CHADLQ6NUI6 762 aa17.57■□□□□ 0.4
ATP13A3-204ENST00000446356 SP7Q8TDD2 431 aaPredicted RBP17.56■□□□□ 0.4
ATP13A3-204ENST00000446356 CREBZFQ9NS37 354 aa17.56■□□□□ 0.4
ATP13A3-204ENST00000446356 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
ATP13A3-204ENST00000446356 FARP1Q9Y4F1 1045 aaPredicted RBP17.43■□□□□ 0.38
ATP13A3-204ENST00000446356 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
ATP13A3-204ENST00000446356 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
ATP13A3-204ENST00000446356 HAX1O00165 279 aa17.37■□□□□ 0.37
ATP13A3-204ENST00000446356 MNX1P50219 401 aaPredicted RBP17.33■□□□□ 0.36
ATP13A3-204ENST00000446356 IFNLR1Q8IU57 520 aaPredicted RBP17.32■□□□□ 0.36
ATP13A3-204ENST00000446356 SPOCK2Q92563 424 aa17.21■□□□□ 0.35
ATP13A3-204ENST00000446356 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
ATP13A3-204ENST00000446356 EVX2Q03828 476 aa17.17■□□□□ 0.34
ATP13A3-204ENST00000446356 CD44P16070 742 aaKnown RBP17.14■□□□□ 0.33
ATP13A3-204ENST00000446356 C19orf67A6NJJ6 358 aa17.11■□□□□ 0.33
ATP13A3-204ENST00000446356 NUBP1P53384 320 aa17.11■□□□□ 0.33
ATP13A3-204ENST00000446356 FAM212AQ96EL1 285 aa17.11■□□□□ 0.33
ATP13A3-204ENST00000446356 RASEFQ8IZ41 740 aa17.07■□□□□ 0.32
ATP13A3-204ENST00000446356 TSPYL2Q9H2G4 693 aaPredicted RBP17.05■□□□□ 0.32
ATP13A3-204ENST00000446356 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
ATP13A3-204ENST00000446356 DCAF8Q5TAQ9 597 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms