RNA–Protein interactions for RNA: ENST00000457986.5

ATP13A3-205, Transcript of ATPase 13A3, humanhuman

TSL 3

Gene ATP13A3, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-205ENST00000457986 NISCHQ9Y2I1 1504 aa61.28■■■■■ 7.4
ATP13A3-205ENST00000457986 CCDC180Q9P1Z9 1646 aa54.95■■■■■ 6.39
ATP13A3-205ENST00000457986 ABCC9O60706 1549 aa54.45■■■■■ 6.31
ATP13A3-205ENST00000457986 RB1CC1Q8TDY2 1594 aa52.08■■■■■ 5.93
ATP13A3-205ENST00000457986 NACADO15069 1562 aa51.8■■■■■ 5.88
ATP13A3-205ENST00000457986 DCAF8L2P0C7V8 631 aa51.47■■■■■ 5.83
ATP13A3-205ENST00000457986 MYO15BQ96JP2 1530 aa51.22■■■■■ 5.79
ATP13A3-205ENST00000457986 ZCCHC6Q5VYS8 1495 aaKnown RBP50.91■■■■■ 5.74
ATP13A3-205ENST00000457986 UNC13AQ9UPW8 1703 aa50.88■■■■■ 5.74
ATP13A3-205ENST00000457986 DCAF1Q9Y4B6 1507 aa50.7■■■■■ 5.71
ATP13A3-205ENST00000457986 PABPN1Q86U42 306 aaKnown RBP eCLIP50.67■■■■■ 5.7
ATP13A3-205ENST00000457986 DNAJC5BQ9UF47 199 aa50.58■■■■■ 5.69
ATP13A3-205ENST00000457986 BICRAQ9NZM4 1560 aa50.47■■■■■ 5.67
ATP13A3-205ENST00000457986 SCRIBQ14160 1630 aa50.03■■■■■ 5.6
ATP13A3-205ENST00000457986 SHROOM4Q9ULL8 1493 aa49.97■■■■■ 5.59
ATP13A3-205ENST00000457986 EIF4G1Q04637 1599 aaKnown RBP49.25■■■■■ 5.47
ATP13A3-205ENST00000457986 CC2D2AQ9P2K1 1620 aa49.24■■■■■ 5.47
ATP13A3-205ENST00000457986 CECR2Q9BXF3 1484 aa49.04■■■■■ 5.44
ATP13A3-205ENST00000457986 SMARCA4P51532 1647 aa47.77■■■■■ 5.24
ATP13A3-205ENST00000457986 NCAPD3P42695 1498 aa47.76■■■■■ 5.24
ATP13A3-205ENST00000457986 ATAD2BQ9ULI0 1458 aa47.67■■■■■ 5.22
ATP13A3-205ENST00000457986 SMARCA2P51531 1590 aa47.64■■■■■ 5.22
ATP13A3-205ENST00000457986 BAZ1AQ9NRL2 1556 aaPredicted RBP47.61■■■■■ 5.21
ATP13A3-205ENST00000457986 HMGXB3Q12766 1538 aa47.53■■■■■ 5.2
ATP13A3-205ENST00000457986 PEG3Q9GZU2 1588 aa47.3■■■■■ 5.16
ATP13A3-205ENST00000457986 BAZ1BQ9UIG0 1483 aaKnown RBP47.28■■■■■ 5.16
ATP13A3-205ENST00000457986 MROH2BQ7Z745 1585 aa47.2■■■■■ 5.15
ATP13A3-205ENST00000457986 ERCC6Q03468 1493 aa47.07■■■■■ 5.13
ATP13A3-205ENST00000457986 CUX2O14529 1486 aa46.86■■■■■ 5.09
ATP13A3-205ENST00000457986 NESP48681 1621 aa46.86■■■■■ 5.09
ATP13A3-205ENST00000457986 LAMC3Q9Y6N6 1575 aa46.7■■■■■ 5.07
ATP13A3-205ENST00000457986 WIZO95785 1651 aa46.68■■■■■ 5.06
ATP13A3-205ENST00000457986 THOC2Q8NI27 1593 aaKnown RBP46.41■■■■■ 5.02
ATP13A3-205ENST00000457986 PDS5BQ9NTI5 1447 aa46.39■■■■■ 5.02
ATP13A3-205ENST00000457986 KIF21AQ7Z4S6 1674 aa46.36■■■■■ 5.01
ATP13A3-205ENST00000457986 RSF1Q96T23 1441 aaPredicted RBP46.35■■■■■ 5.01
ATP13A3-205ENST00000457986 CADPSQ9ULU8 1353 aa46.32■■■■■ 5.01
ATP13A3-205ENST00000457986 DNAJC5Q9H3Z4 198 aa46.25■■■■■ 4.99
ATP13A3-205ENST00000457986 TOP2AP11388 1531 aaKnown RBP46.18■■■■■ 4.98
ATP13A3-205ENST00000457986 MRC2Q9UBG0 1479 aa45.98■■■■■ 4.95
ATP13A3-205ENST00000457986 CFTRP13569 1480 aa45.89■■■■■ 4.94
ATP13A3-205ENST00000457986 CEP164Q9UPV0 1460 aa45.89■■■■■ 4.94
ATP13A3-205ENST00000457986 WDR62O43379 1518 aa45.86■■■■■ 4.93
ATP13A3-205ENST00000457986 FANCD2Q9BXW9 1451 aa45.83■■■■■ 4.93
ATP13A3-205ENST00000457986 PRDM2Q13029 1718 aa45.6■■■■■ 4.89
ATP13A3-205ENST00000457986 CCDC88BA6NC98 1476 aa45.55■■■■■ 4.88
ATP13A3-205ENST00000457986 URB2Q14146 1524 aaKnown RBP45.4■■■■■ 4.86
ATP13A3-205ENST00000457986 TOPBP1Q92547 1522 aa45.01■■■■■ 4.8
ATP13A3-205ENST00000457986 ABCC8Q09428 1581 aa44.97■■■■■ 4.79
ATP13A3-205ENST00000457986 IFT140Q96RY7 1462 aa44.94■■■■■ 4.78
ATP13A3-205ENST00000457986 DNMBPQ6XZF7 1577 aa44.92■■■■■ 4.78
ATP13A3-205ENST00000457986 ZNF608Q9ULD9 1512 aaPredicted RBP44.75■■■■■ 4.76
ATP13A3-205ENST00000457986 OSCARQ8IYS5 282 aa44.67■■■■■ 4.74
ATP13A3-205ENST00000457986 EIF4G3O43432 1585 aaKnown RBP44.63■■■■■ 4.73
ATP13A3-205ENST00000457986 TARBP1Q13395 1621 aaKnown RBP44.57■■■■■ 4.73
ATP13A3-205ENST00000457986 POLA1P09884 1462 aaPredicted RBP44.57■■■■■ 4.73
ATP13A3-205ENST00000457986 SUPT5HO00267 1087 aaKnown RBP44.53■■■■■ 4.72
ATP13A3-205ENST00000457986 TRIM41Q8WV44 630 aa44.42■■■■■ 4.7
ATP13A3-205ENST00000457986 AQRO60306 1485 aaKnown RBP eCLIP44.39■■■■■ 4.71e-8■■■■■ 40.3
ATP13A3-205ENST00000457986 CUX1P39880 1505 aa44.34■■■■■ 4.69
ATP13A3-205ENST00000457986 FGD5Q6ZNL6 1462 aa44.34■■■■■ 4.69
ATP13A3-205ENST00000457986 RAD54L2Q9Y4B4 1467 aa44.34■■■■■ 4.69
ATP13A3-205ENST00000457986 SOGA1O94964 1423 aa44.33■■■■■ 4.69
ATP13A3-205ENST00000457986 WDR97A6NE52 1622 aa44.25■■■■■ 4.67
ATP13A3-205ENST00000457986 CHD1O14646 1710 aa44.22■■■■■ 4.67
ATP13A3-205ENST00000457986 TDRD9Q8NDG6 1382 aaKnown RBP44.17■■■■■ 4.66
ATP13A3-205ENST00000457986 RIMBP3CA6NJZ7 1639 aa44.13■■■■■ 4.65
ATP13A3-205ENST00000457986 RIMBP3BA6NNM3 1639 aa44.13■■■■■ 4.65
ATP13A3-205ENST00000457986 RIMBP3Q9UFD9 1639 aa44.13■■■■■ 4.65
ATP13A3-205ENST00000457986 ARHGEF11O15085 1522 aa44.04■■■■■ 4.64
ATP13A3-205ENST00000457986 FBLN2P98095 1184 aa44.03■■■■■ 4.64
ATP13A3-205ENST00000457986 SNAPC4Q5SXM2 1469 aa44.02■■■■■ 4.64
ATP13A3-205ENST00000457986 GRIN2BQ13224 1484 aa43.96■■■■■ 4.63
ATP13A3-205ENST00000457986 MAGI1Q96QZ7 1491 aaPredicted RBP43.95■■■■■ 4.63
ATP13A3-205ENST00000457986 ABCA10Q8WWZ4 1543 aa43.88■■■■■ 4.61
ATP13A3-205ENST00000457986 PBRM1Q86U86 1689 aa43.88■■■■■ 4.61
ATP13A3-205ENST00000457986 GAPVD1Q14C86 1478 aa43.84■■■■■ 4.61
ATP13A3-205ENST00000457986 ABCA5Q8WWZ7 1642 aa43.8■■■■■ 4.6
ATP13A3-205ENST00000457986 BIVM-ERCC5R4GMW8 1640 aa43.8■■■■■ 4.6
ATP13A3-205ENST00000457986 SYNJ2O15056 1496 aa43.78■■■■■ 4.6
ATP13A3-205ENST00000457986 TOP2BQ02880 1626 aa43.78■■■■■ 4.6
ATP13A3-205ENST00000457986 CHMP7Q8WUX9 453 aaPredicted RBP43.78■■■■■ 4.6
ATP13A3-205ENST00000457986 WRNQ14191 1432 aaPredicted RBP eCLIP43.78■■■■■ 4.6
ATP13A3-205ENST00000457986 SYNJ1O43426 1573 aa43.76■■■■■ 4.6
ATP13A3-205ENST00000457986 CLASP1Q7Z460 1538 aa43.7■■■■■ 4.59
ATP13A3-205ENST00000457986 ARAP1Q96P48 1450 aa43.61■■■■■ 4.57
ATP13A3-205ENST00000457986 CYB5RLQ6IPT4 315 aa43.58■■■■■ 4.57
ATP13A3-205ENST00000457986 ADAMTS12P58397 1594 aa43.46■■■■■ 4.55
ATP13A3-205ENST00000457986 GRIN2AQ12879 1464 aa43.39■■■■■ 4.54
ATP13A3-205ENST00000457986 ERICH3Q5RHP9 1530 aa43.36■■■■■ 4.53
ATP13A3-205ENST00000457986 FHAD1B1AJZ9 1412 aa43.31■■■■■ 4.52
ATP13A3-205ENST00000457986 CEP170Q5SW79 1584 aa43.22■■■■■ 4.51
ATP13A3-205ENST00000457986 NUP160Q12769 1436 aa43.22■■■■■ 4.51
ATP13A3-205ENST00000457986 TRHP20396 242 aaPredicted RBP43.02■■■■■ 4.48
ATP13A3-205ENST00000457986 SHROOM2Q13796 1616 aa43.01■■■■■ 4.48
ATP13A3-205ENST00000457986 ERCC6L2Q5T890 1561 aa42.99■■■■■ 4.47
ATP13A3-205ENST00000457986 KIF27Q86VH2 1401 aa42.93■■■■■ 4.46
ATP13A3-205ENST00000457986 CUL7Q14999 1698 aa42.85■■■■■ 4.45
ATP13A3-205ENST00000457986 RUSC2Q8N2Y8 1516 aa42.84■■■■■ 4.45
ATP13A3-205ENST00000457986 IGF1RP08069 1367 aa42.77■■■■■ 4.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms