Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NEK4P51957 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
NEK4P51957 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
NEK4P51957 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.86■■■□□ 2.53
NEK4P51957 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
NEK4P51957 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
NEK4P51957 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.85■■■□□ 2.53
NEK4P51957 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
NEK4P51957 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
NEK4P51957 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.83■■■□□ 2.53
NEK4P51957 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
NEK4P51957 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
NEK4P51957 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.82■■■□□ 2.52
NEK4P51957 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.81■■■□□ 2.52
NEK4P51957 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NEK4P51957 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
NEK4P51957 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
NEK4P51957 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
NEK4P51957 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
NEK4P51957 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NEK4P51957 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
NEK4P51957 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
NEK4P51957 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
NEK4P51957 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
NEK4P51957 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
NEK4P51957 AC127502.1-201ENST00000399971 1502 ntBASIC30.79■■■□□ 2.52
NEK4P51957 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
NEK4P51957 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.79■■■□□ 2.52
NEK4P51957 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
NEK4P51957 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
NEK4P51957 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
NEK4P51957 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
NEK4P51957 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
NEK4P51957 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
NEK4P51957 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
NEK4P51957 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
NEK4P51957 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
NEK4P51957 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NEK4P51957 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
NEK4P51957 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.75■■■□□ 2.51
NEK4P51957 AP004833.2-201ENST00000532228 1454 ntBASIC30.75■■■□□ 2.51
NEK4P51957 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
NEK4P51957 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.74■■■□□ 2.51
NEK4P51957 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.74■■■□□ 2.51
NEK4P51957 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
NEK4P51957 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.73■■■□□ 2.51
NEK4P51957 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NEK4P51957 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NEK4P51957 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.72■■■□□ 2.51
NEK4P51957 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NEK4P51957 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.72■■■□□ 2.51
NEK4P51957 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.7■■■□□ 2.51
NEK4P51957 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.7■■■□□ 2.51
NEK4P51957 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.7■■■□□ 2.51
NEK4P51957 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.7■■■□□ 2.51
NEK4P51957 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NEK4P51957 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
NEK4P51957 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
NEK4P51957 MIR762-201ENST00000390236 83 ntBASIC30.69■■■□□ 2.5
NEK4P51957 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
NEK4P51957 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
NEK4P51957 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
NEK4P51957 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
NEK4P51957 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.67■■■□□ 2.5
NEK4P51957 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NEK4P51957 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
NEK4P51957 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
NEK4P51957 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
NEK4P51957 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NEK4P51957 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NEK4P51957 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NEK4P51957 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NEK4P51957 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.63■■■□□ 2.49
NEK4P51957 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
NEK4P51957 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
NEK4P51957 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
NEK4P51957 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NEK4P51957 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.62■■■□□ 2.49
NEK4P51957 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
NEK4P51957 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NEK4P51957 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.61■■■□□ 2.49
NEK4P51957 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
NEK4P51957 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NEK4P51957 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.59■■■□□ 2.49
NEK4P51957 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
NEK4P51957 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
NEK4P51957 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NEK4P51957 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.58■■■□□ 2.49
NEK4P51957 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
NEK4P51957 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NEK4P51957 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
NEK4P51957 SUZ12P1-203ENST00000578195 985 ntBASIC30.56■■■□□ 2.48
NEK4P51957 AL121749.1-202ENST00000609313 2153 ntBASIC30.56■■■□□ 2.48
NEK4P51957 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.55■■■□□ 2.48
NEK4P51957 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NEK4P51957 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NEK4P51957 AC100797.4-201ENST00000631653 1827 ntBASIC30.54■■■□□ 2.48
NEK4P51957 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.54■■■□□ 2.48
NEK4P51957 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NEK4P51957 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms