Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF144AP50876 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF144AP50876 AL162393.1-201ENST00000437852 946 ntBASIC23.99■■□□□ 1.43
RNF144AP50876 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
RNF144AP50876 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF144AP50876 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF144AP50876 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF144AP50876 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.98■■□□□ 1.43
RNF144AP50876 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RNF144AP50876 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF144AP50876 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF144AP50876 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF144AP50876 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF144AP50876 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF144AP50876 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.98■■□□□ 1.43
RNF144AP50876 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.98■■□□□ 1.43
RNF144AP50876 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF144AP50876 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF144AP50876 AC127502.1-201ENST00000399971 1502 ntBASIC23.97■■□□□ 1.43
RNF144AP50876 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RNF144AP50876 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF144AP50876 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF144AP50876 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF144AP50876 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF144AP50876 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF144AP50876 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF144AP50876 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF144AP50876 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF144AP50876 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.95■■□□□ 1.43
RNF144AP50876 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RNF144AP50876 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF144AP50876 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF144AP50876 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF144AP50876 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.93■■□□□ 1.42
RNF144AP50876 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.93■■□□□ 1.42
RNF144AP50876 MIR3665-201ENST00000578708 105 ntBASIC23.93■■□□□ 1.42
RNF144AP50876 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF144AP50876 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF144AP50876 MIR6090-201ENST00000622481 60 ntBASIC23.92■■□□□ 1.42
RNF144AP50876 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RNF144AP50876 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF144AP50876 AP006261.1-201ENST00000584783 668 ntBASIC23.91■■□□□ 1.42
RNF144AP50876 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF144AP50876 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RNF144AP50876 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF144AP50876 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RNF144AP50876 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF144AP50876 AC087741.3-201ENST00000624270 1347 ntBASIC23.88■■□□□ 1.41
RNF144AP50876 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF144AP50876 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RNF144AP50876 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RNF144AP50876 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RNF144AP50876 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF144AP50876 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF144AP50876 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF144AP50876 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF144AP50876 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RNF144AP50876 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF144AP50876 RPS2P35-201ENST00000443417 897 ntBASIC23.85■■□□□ 1.41
RNF144AP50876 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.84■■□□□ 1.41
RNF144AP50876 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF144AP50876 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF144AP50876 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
RNF144AP50876 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF144AP50876 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF144AP50876 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF144AP50876 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RNF144AP50876 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RNF144AP50876 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.82■■□□□ 1.4
RNF144AP50876 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RNF144AP50876 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF144AP50876 AC108673.1-201ENST00000510422 1159 ntBASIC23.81■■□□□ 1.4
RNF144AP50876 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF144AP50876 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RNF144AP50876 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF144AP50876 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF144AP50876 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
RNF144AP50876 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF144AP50876 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF144AP50876 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF144AP50876 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF144AP50876 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF144AP50876 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF144AP50876 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF144AP50876 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
RNF144AP50876 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF144AP50876 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.77■■□□□ 1.4
RNF144AP50876 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF144AP50876 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF144AP50876 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF144AP50876 DRD5P2-201ENST00000421395 2012 ntBASIC23.76■■□□□ 1.39
RNF144AP50876 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF144AP50876 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF144AP50876 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF144AP50876 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF144AP50876 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.75■■□□□ 1.39
RNF144AP50876 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF144AP50876 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF144AP50876 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF144AP50876 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms