Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MIR3665-201ENST00000578708 105 ntBASIC25.22■■□□□ 1.63
SLC6A12P48065 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.22■■□□□ 1.63
SLC6A12P48065 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.22■■□□□ 1.63
SLC6A12P48065 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC6A12P48065 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.21■■□□□ 1.63
SLC6A12P48065 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC6A12P48065 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC6A12P48065 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.2■■□□□ 1.62
SLC6A12P48065 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC6A12P48065 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC6A12P48065 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.19■■□□□ 1.62
SLC6A12P48065 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.19■■□□□ 1.62
SLC6A12P48065 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC6A12P48065 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC6A12P48065 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC6A12P48065 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
SLC6A12P48065 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC6A12P48065 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC6A12P48065 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.17■■□□□ 1.62
SLC6A12P48065 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC6A12P48065 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC6A12P48065 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SLC6A12P48065 AP004833.2-201ENST00000532228 1454 ntBASIC25.15■■□□□ 1.62
SLC6A12P48065 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SLC6A12P48065 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC6A12P48065 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SLC6A12P48065 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC6A12P48065 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.14■■□□□ 1.61
SLC6A12P48065 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SLC6A12P48065 AC108673.1-201ENST00000510422 1159 ntBASIC25.13■■□□□ 1.61
SLC6A12P48065 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.13■■□□□ 1.61
SLC6A12P48065 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
SLC6A12P48065 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC6A12P48065 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC6A12P48065 AL162393.1-201ENST00000437852 946 ntBASIC25.12■■□□□ 1.61
SLC6A12P48065 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
SLC6A12P48065 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC6A12P48065 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.11■■□□□ 1.61
SLC6A12P48065 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.11■■□□□ 1.61
SLC6A12P48065 MIR6090-201ENST00000622481 60 ntBASIC25.11■■□□□ 1.61
SLC6A12P48065 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC6A12P48065 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC6A12P48065 AC087741.3-201ENST00000624270 1347 ntBASIC25.09■■□□□ 1.61
SLC6A12P48065 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
SLC6A12P48065 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SLC6A12P48065 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC6A12P48065 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC6A12P48065 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC6A12P48065 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC6A12P48065 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.06■■□□□ 1.6
SLC6A12P48065 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.05■■□□□ 1.6
SLC6A12P48065 DRD5P2-201ENST00000421395 2012 ntBASIC25.05■■□□□ 1.6
SLC6A12P48065 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC6A12P48065 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SLC6A12P48065 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC6A12P48065 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC6A12P48065 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.01■■□□□ 1.59
SLC6A12P48065 AC142086.6-201ENST00000621154 1765 ntBASIC25.01■■□□□ 1.59
SLC6A12P48065 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SLC6A12P48065 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SLC6A12P48065 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SLC6A12P48065 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SLC6A12P48065 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SLC6A12P48065 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC6A12P48065 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SLC6A12P48065 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC6A12P48065 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25■■□□□ 1.59
SLC6A12P48065 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC6A12P48065 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLC6A12P48065 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.98■■□□□ 1.59
SLC6A12P48065 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
SLC6A12P48065 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
SLC6A12P48065 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLC6A12P48065 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.97■■□□□ 1.59
SLC6A12P48065 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.97■■□□□ 1.59
SLC6A12P48065 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.97■■□□□ 1.59
SLC6A12P48065 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SLC6A12P48065 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SLC6A12P48065 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.96■■□□□ 1.59
SLC6A12P48065 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SLC6A12P48065 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SLC6A12P48065 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SLC6A12P48065 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
SLC6A12P48065 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SLC6A12P48065 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SLC6A12P48065 AC044849.2-201ENST00000606596 710 ntBASIC24.95■■□□□ 1.58
SLC6A12P48065 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
SLC6A12P48065 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SLC6A12P48065 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.94■■□□□ 1.58
SLC6A12P48065 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.94■■□□□ 1.58
SLC6A12P48065 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
SLC6A12P48065 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
SLC6A12P48065 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SLC6A12P48065 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.93■■□□□ 1.58
SLC6A12P48065 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.93■■□□□ 1.58
SLC6A12P48065 AC135983.2-203ENST00000454486 1613 ntBASIC24.93■■□□□ 1.58
SLC6A12P48065 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
SLC6A12P48065 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.92■■□□□ 1.58
SLC6A12P48065 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
SLC6A12P48065 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms