Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC35.28■■■■□ 3.24
LTN1O94822 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
LTN1O94822 CHST11-202ENST00000546689 756 ntTSL 2 BASIC35.26■■■■□ 3.24
LTN1O94822 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC35.26■■■■□ 3.24
LTN1O94822 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
LTN1O94822 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC35.25■■■■□ 3.23
LTN1O94822 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
LTN1O94822 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
LTN1O94822 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
LTN1O94822 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC35.22■■■■□ 3.23
LTN1O94822 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
LTN1O94822 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
LTN1O94822 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
LTN1O94822 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
LTN1O94822 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
LTN1O94822 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC35.22■■■■□ 3.23
LTN1O94822 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC35.21■■■■□ 3.23
LTN1O94822 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
LTN1O94822 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC35.2■■■■□ 3.22
LTN1O94822 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC35.18■■■■□ 3.22
LTN1O94822 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC35.18■■■■□ 3.22
LTN1O94822 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
LTN1O94822 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC35.17■■■■□ 3.22
LTN1O94822 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
LTN1O94822 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC35.17■■■■□ 3.22
LTN1O94822 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC35.16■■■■□ 3.22
LTN1O94822 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
LTN1O94822 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
LTN1O94822 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
LTN1O94822 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
LTN1O94822 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC35.13■■■■□ 3.21
LTN1O94822 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC35.13■■■■□ 3.21
LTN1O94822 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC35.12■■■■□ 3.21
LTN1O94822 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC35.12■■■■□ 3.21
LTN1O94822 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC35.12■■■■□ 3.21
LTN1O94822 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC35.1■■■■□ 3.21
LTN1O94822 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
LTN1O94822 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
LTN1O94822 RARRES2P2-201ENST00000394842 485 ntBASIC35.09■■■■□ 3.21
LTN1O94822 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC35.08■■■■□ 3.21
LTN1O94822 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC35.08■■■■□ 3.21
LTN1O94822 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC35.08■■■■□ 3.21
LTN1O94822 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC35.07■■■■□ 3.2
LTN1O94822 GPX1-201ENST00000419349 1106 ntBASIC35.06■■■■□ 3.2
LTN1O94822 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
LTN1O94822 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
LTN1O94822 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC35.05■■■■□ 3.2
LTN1O94822 AC135983.2-203ENST00000454486 1613 ntBASIC35.03■■■■□ 3.2
LTN1O94822 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC35.02■■■■□ 3.2
LTN1O94822 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC35.02■■■■□ 3.2
LTN1O94822 WHAMMP2-203ENST00000563942 1603 ntBASIC35.02■■■■□ 3.2
LTN1O94822 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
LTN1O94822 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC35.01■■■■□ 3.2
LTN1O94822 ABHD17AP5-201ENST00000580133 923 ntBASIC35■■■■□ 3.19
LTN1O94822 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC35■■■■□ 3.19
LTN1O94822 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC34.99■■■■□ 3.19
LTN1O94822 TPT1-202ENST00000379055 948 ntTSL 2 BASIC34.97■■■■□ 3.19
LTN1O94822 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
LTN1O94822 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
LTN1O94822 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC34.95■■■■□ 3.19
LTN1O94822 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
LTN1O94822 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC34.93■■■■□ 3.18
LTN1O94822 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC34.93■■■■□ 3.18
LTN1O94822 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC34.92■■■■□ 3.18
LTN1O94822 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC34.92■■■■□ 3.18
LTN1O94822 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC34.9■■■■□ 3.18
LTN1O94822 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC34.9■■■■□ 3.18
LTN1O94822 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
LTN1O94822 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
LTN1O94822 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
LTN1O94822 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
LTN1O94822 AC127502.1-201ENST00000399971 1502 ntBASIC34.89■■■■□ 3.18
LTN1O94822 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC34.88■■■■□ 3.17
LTN1O94822 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
LTN1O94822 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC34.87■■■■□ 3.17
LTN1O94822 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC34.87■■■■□ 3.17
LTN1O94822 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
LTN1O94822 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
LTN1O94822 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
LTN1O94822 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
LTN1O94822 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
LTN1O94822 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
LTN1O94822 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC34.84■■■■□ 3.17
LTN1O94822 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
LTN1O94822 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
LTN1O94822 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC34.82■■■■□ 3.16
LTN1O94822 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC34.81■■■■□ 3.16
LTN1O94822 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC34.81■■■■□ 3.16
LTN1O94822 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
LTN1O94822 AL135925.1-201ENST00000605920 1701 ntBASIC34.81■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms