Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.81■■■□□ 2.52
PRDM1O75626 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.81■■■□□ 2.52
PRDM1O75626 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PRDM1O75626 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.79■■■□□ 2.52
PRDM1O75626 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
PRDM1O75626 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
PRDM1O75626 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
PRDM1O75626 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.77■■■□□ 2.52
PRDM1O75626 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.77■■■□□ 2.52
PRDM1O75626 ABCB10P1-201ENST00000614297 2181 ntBASIC30.76■■■□□ 2.51
PRDM1O75626 LINC01971-201ENST00000617888 1048 ntBASIC30.75■■■□□ 2.51
PRDM1O75626 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PRDM1O75626 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PRDM1O75626 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.75■■■□□ 2.51
PRDM1O75626 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.74■■■□□ 2.51
PRDM1O75626 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.74■■■□□ 2.51
PRDM1O75626 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PRDM1O75626 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PRDM1O75626 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.73■■■□□ 2.51
PRDM1O75626 DUX4L11-201ENST00000611504 1267 ntBASIC30.73■■■□□ 2.51
PRDM1O75626 DUX4L12-201ENST00000614593 1267 ntBASIC30.73■■■□□ 2.51
PRDM1O75626 DUX4L14-201ENST00000621227 1267 ntBASIC30.73■■■□□ 2.51
PRDM1O75626 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.72■■■□□ 2.51
PRDM1O75626 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.72■■■□□ 2.51
PRDM1O75626 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
PRDM1O75626 LINC00273-201ENST00000539813 1452 ntBASIC30.7■■■□□ 2.51
PRDM1O75626 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PRDM1O75626 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.69■■■□□ 2.5
PRDM1O75626 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.69■■■□□ 2.5
PRDM1O75626 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.69■■■□□ 2.5
PRDM1O75626 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PRDM1O75626 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PRDM1O75626 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.68■■■□□ 2.5
PRDM1O75626 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PRDM1O75626 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PRDM1O75626 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRDM1O75626 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
PRDM1O75626 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PRDM1O75626 HLA-V-202ENST00000446817 847 ntBASIC30.66■■■□□ 2.5
PRDM1O75626 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
PRDM1O75626 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.65■■■□□ 2.5
PRDM1O75626 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.65■■■□□ 2.5
PRDM1O75626 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
PRDM1O75626 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.65■■■□□ 2.5
PRDM1O75626 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
PRDM1O75626 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
PRDM1O75626 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PRDM1O75626 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.64■■■□□ 2.5
PRDM1O75626 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
PRDM1O75626 CR559946.2-201ENST00000623684 991 ntBASIC30.62■■■□□ 2.49
PRDM1O75626 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PRDM1O75626 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
PRDM1O75626 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PRDM1O75626 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.61■■■□□ 2.49
PRDM1O75626 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.61■■■□□ 2.49
PRDM1O75626 MIR3648-2-201ENST00000581792 180 ntBASIC30.61■■■□□ 2.49
PRDM1O75626 MIR3648-1-201ENST00000615959 180 ntBASIC30.61■■■□□ 2.49
PRDM1O75626 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PRDM1O75626 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PRDM1O75626 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PRDM1O75626 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
PRDM1O75626 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
PRDM1O75626 AC016575.1-201ENST00000607026 382 ntBASIC30.6■■■□□ 2.49
PRDM1O75626 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.6■■■□□ 2.49
PRDM1O75626 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PRDM1O75626 WHAMMP2-203ENST00000563942 1603 ntBASIC30.59■■■□□ 2.49
PRDM1O75626 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.59■■■□□ 2.49
PRDM1O75626 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
PRDM1O75626 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PRDM1O75626 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.58■■■□□ 2.49
PRDM1O75626 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.58■■■□□ 2.49
PRDM1O75626 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
PRDM1O75626 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PRDM1O75626 AC135983.2-203ENST00000454486 1613 ntBASIC30.57■■■□□ 2.48
PRDM1O75626 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PRDM1O75626 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PRDM1O75626 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
PRDM1O75626 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.56■■■□□ 2.48
PRDM1O75626 DUX4L13-201ENST00000554103 1267 ntBASIC30.56■■■□□ 2.48
PRDM1O75626 DUX4L15-201ENST00000611059 1267 ntBASIC30.56■■■□□ 2.48
PRDM1O75626 DUX4L23-201ENST00000615195 1269 ntBASIC30.56■■■□□ 2.48
PRDM1O75626 DUX4L24-201ENST00000617576 1269 ntBASIC30.56■■■□□ 2.48
PRDM1O75626 DUX4L22-201ENST00000618238 1269 ntBASIC30.56■■■□□ 2.48
PRDM1O75626 DUX4L20-201ENST00000619712 1269 ntBASIC30.56■■■□□ 2.48
PRDM1O75626 DUX4L21-201ENST00000622058 1269 ntBASIC30.56■■■□□ 2.48
PRDM1O75626 DUX4L10-201ENST00000622460 1267 ntBASIC30.56■■■□□ 2.48
PRDM1O75626 DUX4L25-201ENST00000624915 1269 ntBASIC30.56■■■□□ 2.48
PRDM1O75626 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.56■■■□□ 2.48
PRDM1O75626 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.56■■■□□ 2.48
PRDM1O75626 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PRDM1O75626 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.55■■■□□ 2.48
PRDM1O75626 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PRDM1O75626 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PRDM1O75626 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PRDM1O75626 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.55■■■□□ 2.48
PRDM1O75626 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
PRDM1O75626 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.53■■■□□ 2.48
PRDM1O75626 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
PRDM1O75626 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PRDM1O75626 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms