Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
UPK2O00526 AP004833.2-201ENST00000532228 1454 ntBASIC20.78■□□□□ 0.92
UPK2O00526 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
UPK2O00526 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPK2O00526 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
UPK2O00526 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
UPK2O00526 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPK2O00526 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPK2O00526 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPK2O00526 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UPK2O00526 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UPK2O00526 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK2O00526 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UPK2O00526 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPK2O00526 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UPK2O00526 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
UPK2O00526 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UPK2O00526 AC127502.1-201ENST00000399971 1502 ntBASIC20.73■□□□□ 0.91
UPK2O00526 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
UPK2O00526 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK2O00526 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
UPK2O00526 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK2O00526 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UPK2O00526 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
UPK2O00526 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.72■□□□□ 0.91
UPK2O00526 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPK2O00526 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPK2O00526 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
UPK2O00526 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.71■□□□□ 0.91
UPK2O00526 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPK2O00526 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.71■□□□□ 0.91
UPK2O00526 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPK2O00526 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPK2O00526 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
UPK2O00526 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPK2O00526 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPK2O00526 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPK2O00526 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
UPK2O00526 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.7■□□□□ 0.9
UPK2O00526 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.7■□□□□ 0.9
UPK2O00526 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
UPK2O00526 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.69■□□□□ 0.9
UPK2O00526 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK2O00526 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK2O00526 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.69■□□□□ 0.9
UPK2O00526 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.69■□□□□ 0.9
UPK2O00526 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.69■□□□□ 0.9
UPK2O00526 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.69■□□□□ 0.9
UPK2O00526 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
UPK2O00526 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UPK2O00526 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UPK2O00526 MIR762-201ENST00000390236 83 ntBASIC20.68■□□□□ 0.9
UPK2O00526 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.68■□□□□ 0.9
UPK2O00526 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK2O00526 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK2O00526 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.67■□□□□ 0.9
UPK2O00526 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPK2O00526 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK2O00526 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK2O00526 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
UPK2O00526 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK2O00526 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPK2O00526 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK2O00526 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK2O00526 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
UPK2O00526 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.65■□□□□ 0.9
UPK2O00526 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UPK2O00526 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPK2O00526 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPK2O00526 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.64■□□□□ 0.9
UPK2O00526 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
UPK2O00526 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UPK2O00526 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
UPK2O00526 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.63■□□□□ 0.89
UPK2O00526 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPK2O00526 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPK2O00526 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPK2O00526 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
UPK2O00526 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK2O00526 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
UPK2O00526 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK2O00526 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.62■□□□□ 0.89
UPK2O00526 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UPK2O00526 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
UPK2O00526 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPK2O00526 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPK2O00526 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPK2O00526 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.6■□□□□ 0.89
UPK2O00526 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPK2O00526 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPK2O00526 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK2O00526 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK2O00526 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK2O00526 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
UPK2O00526 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK2O00526 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK2O00526 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.58■□□□□ 0.88
UPK2O00526 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPK2O00526 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK2O00526 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms