Protein–RNA interactions for Protein: A0A0K0K1B3

TRBV30, T-cell receptor beta variable 30 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV30A0A0K0K1B3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRBV30A0A0K0K1B3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.51■□□□□ 0.39
TRBV30A0A0K0K1B3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV30A0A0K0K1B3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV30A0A0K0K1B3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV30A0A0K0K1B3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV30A0A0K0K1B3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV30A0A0K0K1B3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV30A0A0K0K1B3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV30A0A0K0K1B3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV30A0A0K0K1B3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.49■□□□□ 0.39
TRBV30A0A0K0K1B3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV30A0A0K0K1B3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV30A0A0K0K1B3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV30A0A0K0K1B3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV30A0A0K0K1B3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV30A0A0K0K1B3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.47■□□□□ 0.39
TRBV30A0A0K0K1B3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV30A0A0K0K1B3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV30A0A0K0K1B3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.47■□□□□ 0.39
TRBV30A0A0K0K1B3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV30A0A0K0K1B3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV30A0A0K0K1B3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV30A0A0K0K1B3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV30A0A0K0K1B3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRBV30A0A0K0K1B3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV30A0A0K0K1B3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV30A0A0K0K1B3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV30A0A0K0K1B3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV30A0A0K0K1B3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRBV30A0A0K0K1B3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV30A0A0K0K1B3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV30A0A0K0K1B3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV30A0A0K0K1B3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV30A0A0K0K1B3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV30A0A0K0K1B3 AL135925.1-201ENST00000605920 1701 ntBASIC17.44■□□□□ 0.38
TRBV30A0A0K0K1B3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV30A0A0K0K1B3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV30A0A0K0K1B3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV30A0A0K0K1B3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV30A0A0K0K1B3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV30A0A0K0K1B3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.42■□□□□ 0.38
TRBV30A0A0K0K1B3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.42■□□□□ 0.38
TRBV30A0A0K0K1B3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV30A0A0K0K1B3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRBV30A0A0K0K1B3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV30A0A0K0K1B3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV30A0A0K0K1B3 WASH5P-204ENST00000632292 975 ntBASIC17.41■□□□□ 0.38
TRBV30A0A0K0K1B3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV30A0A0K0K1B3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV30A0A0K0K1B3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV30A0A0K0K1B3 DRD5P2-201ENST00000421395 2012 ntBASIC17.4■□□□□ 0.38
TRBV30A0A0K0K1B3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV30A0A0K0K1B3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV30A0A0K0K1B3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV30A0A0K0K1B3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV30A0A0K0K1B3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV30A0A0K0K1B3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV30A0A0K0K1B3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRBV30A0A0K0K1B3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRBV30A0A0K0K1B3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV30A0A0K0K1B3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV30A0A0K0K1B3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV30A0A0K0K1B3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV30A0A0K0K1B3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV30A0A0K0K1B3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV30A0A0K0K1B3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV30A0A0K0K1B3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV30A0A0K0K1B3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV30A0A0K0K1B3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV30A0A0K0K1B3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV30A0A0K0K1B3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV30A0A0K0K1B3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRBV30A0A0K0K1B3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV30A0A0K0K1B3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV30A0A0K0K1B3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV30A0A0K0K1B3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV30A0A0K0K1B3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV30A0A0K0K1B3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.34■□□□□ 0.37
TRBV30A0A0K0K1B3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV30A0A0K0K1B3 AL133380.1-201ENST00000506013 324 ntBASIC17.34■□□□□ 0.37
TRBV30A0A0K0K1B3 AL449106.1-201ENST00000608517 1980 ntBASIC17.34■□□□□ 0.37
TRBV30A0A0K0K1B3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV30A0A0K0K1B3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV30A0A0K0K1B3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV30A0A0K0K1B3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV30A0A0K0K1B3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV30A0A0K0K1B3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV30A0A0K0K1B3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV30A0A0K0K1B3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV30A0A0K0K1B3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRBV30A0A0K0K1B3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRBV30A0A0K0K1B3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV30A0A0K0K1B3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRBV30A0A0K0K1B3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV30A0A0K0K1B3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV30A0A0K0K1B3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV30A0A0K0K1B3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV30A0A0K0K1B3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV30A0A0K0K1B3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms