Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-1A0A0B4J245 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-1A0A0B4J245 AL449106.1-201ENST00000608517 1980 ntBASIC18.25■□□□□ 0.51
TRAV12-1A0A0B4J245 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-1A0A0B4J245 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-1A0A0B4J245 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-1A0A0B4J245 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-1A0A0B4J245 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-1A0A0B4J245 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV12-1A0A0B4J245 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-1A0A0B4J245 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV12-1A0A0B4J245 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-1A0A0B4J245 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAV12-1A0A0B4J245 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV12-1A0A0B4J245 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-1A0A0B4J245 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV12-1A0A0B4J245 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-1A0A0B4J245 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-1A0A0B4J245 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-1A0A0B4J245 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-1A0A0B4J245 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-1A0A0B4J245 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-1A0A0B4J245 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-1A0A0B4J245 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-1A0A0B4J245 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-1A0A0B4J245 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-1A0A0B4J245 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-1A0A0B4J245 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV12-1A0A0B4J245 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV12-1A0A0B4J245 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV12-1A0A0B4J245 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV12-1A0A0B4J245 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV12-1A0A0B4J245 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV12-1A0A0B4J245 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV12-1A0A0B4J245 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-1A0A0B4J245 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-1A0A0B4J245 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-1A0A0B4J245 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV12-1A0A0B4J245 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-1A0A0B4J245 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV12-1A0A0B4J245 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-1A0A0B4J245 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRAV12-1A0A0B4J245 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-1A0A0B4J245 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-1A0A0B4J245 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV12-1A0A0B4J245 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-1A0A0B4J245 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-1A0A0B4J245 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-1A0A0B4J245 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV12-1A0A0B4J245 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV12-1A0A0B4J245 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-1A0A0B4J245 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-1A0A0B4J245 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV12-1A0A0B4J245 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV12-1A0A0B4J245 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV12-1A0A0B4J245 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV12-1A0A0B4J245 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV12-1A0A0B4J245 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV12-1A0A0B4J245 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TRAV12-1A0A0B4J245 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV12-1A0A0B4J245 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV12-1A0A0B4J245 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV12-1A0A0B4J245 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV12-1A0A0B4J245 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV12-1A0A0B4J245 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV12-1A0A0B4J245 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV12-1A0A0B4J245 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV12-1A0A0B4J245 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV12-1A0A0B4J245 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV12-1A0A0B4J245 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV12-1A0A0B4J245 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV12-1A0A0B4J245 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV12-1A0A0B4J245 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAV12-1A0A0B4J245 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-1A0A0B4J245 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-1A0A0B4J245 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-1A0A0B4J245 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-1A0A0B4J245 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV12-1A0A0B4J245 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV12-1A0A0B4J245 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRAV12-1A0A0B4J245 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV12-1A0A0B4J245 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV12-1A0A0B4J245 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV12-1A0A0B4J245 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV12-1A0A0B4J245 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.1■□□□□ 0.49
TRAV12-1A0A0B4J245 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRAV12-1A0A0B4J245 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-1A0A0B4J245 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-1A0A0B4J245 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV12-1A0A0B4J245 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV12-1A0A0B4J245 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAV12-1A0A0B4J245 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAV12-1A0A0B4J245 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV12-1A0A0B4J245 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV12-1A0A0B4J245 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRAV12-1A0A0B4J245 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRAV12-1A0A0B4J245 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV12-1A0A0B4J245 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV12-1A0A0B4J245 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV12-1A0A0B4J245 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms