Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MTHFD1P11586 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
MTHFD1P11586 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 AC007952.6-201ENST00000573168 2673 ntBASIC19.87■□□□□ 0.77
MTHFD1P11586 AC003957.1-201ENST00000625108 2673 ntBASIC19.87■□□□□ 0.77
MTHFD1P11586 PLK5-205ENST00000642079 1969 ntBASIC19.87■□□□□ 0.77
MTHFD1P11586 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.87■□□□□ 0.77
MTHFD1P11586 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.87■□□□□ 0.77
MTHFD1P11586 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.87■□□□□ 0.77
MTHFD1P11586 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.87■□□□□ 0.77
MTHFD1P11586 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.87■□□□□ 0.77
MTHFD1P11586 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.87■□□□□ 0.77
MTHFD1P11586 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.87■□□□□ 0.77
MTHFD1P11586 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.87■□□□□ 0.77
MTHFD1P11586 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
MTHFD1P11586 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MTHFD1P11586 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MTHFD1P11586 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
MTHFD1P11586 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
MTHFD1P11586 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.86■□□□□ 0.77
MTHFD1P11586 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.86■□□□□ 0.77
MTHFD1P11586 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.86■□□□□ 0.77
MTHFD1P11586 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.86■□□□□ 0.77
MTHFD1P11586 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.86■□□□□ 0.77
MTHFD1P11586 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.86■□□□□ 0.77
MTHFD1P11586 MIR2861-201ENST00000636310 90 ntBASIC19.86■□□□□ 0.77
MTHFD1P11586 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MTHFD1P11586 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.86■□□□□ 0.77
MTHFD1P11586 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MTHFD1P11586 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.85■□□□□ 0.77
MTHFD1P11586 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 AC006128.1-201ENST00000624704 1661 ntBASIC19.85■□□□□ 0.77
MTHFD1P11586 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.85■□□□□ 0.77
MTHFD1P11586 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.85■□□□□ 0.77
MTHFD1P11586 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MTHFD1P11586 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.85■□□□□ 0.77
MTHFD1P11586 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.85■□□□□ 0.77
MTHFD1P11586 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
MTHFD1P11586 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.85■□□□□ 0.77
MTHFD1P11586 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.85■□□□□ 0.77
MTHFD1P11586 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MTHFD1P11586 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFD1P11586 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFD1P11586 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
MTHFD1P11586 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFD1P11586 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFD1P11586 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MTHFD1P11586 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.84■□□□□ 0.77
MTHFD1P11586 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
MTHFD1P11586 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFD1P11586 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MTHFD1P11586 AFG3L1P-217ENST00000557444 2447 ntBASIC19.84■□□□□ 0.77
MTHFD1P11586 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.84■□□□□ 0.77
MTHFD1P11586 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MTHFD1P11586 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
MTHFD1P11586 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
MTHFD1P11586 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MTHFD1P11586 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MTHFD1P11586 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MTHFD1P11586 RNA5SP413-201ENST00000516373 109 ntBASIC19.83■□□□□ 0.77
MTHFD1P11586 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.83■□□□□ 0.77
MTHFD1P11586 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MTHFD1P11586 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
MTHFD1P11586 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.83■□□□□ 0.76
MTHFD1P11586 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MTHFD1P11586 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms