Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHAC2Q9Y5I4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHAC2Q9Y5I4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHAC2Q9Y5I4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHAC2Q9Y5I4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHAC2Q9Y5I4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.14■■□□□ 1.46
PCDHAC2Q9Y5I4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 KRT16P5-201ENST00000455284 522 ntBASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
PCDHAC2Q9Y5I4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PCDHAC2Q9Y5I4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHAC2Q9Y5I4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHAC2Q9Y5I4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PCDHAC2Q9Y5I4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.13■■□□□ 1.45
PCDHAC2Q9Y5I4 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDHAC2Q9Y5I4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.13■■□□□ 1.45
PCDHAC2Q9Y5I4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHAC2Q9Y5I4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHAC2Q9Y5I4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHAC2Q9Y5I4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHAC2Q9Y5I4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHAC2Q9Y5I4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHAC2Q9Y5I4 RN7SL850P-201ENST00000579959 291 ntBASIC24.12■■□□□ 1.45
PCDHAC2Q9Y5I4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHAC2Q9Y5I4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHAC2Q9Y5I4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHAC2Q9Y5I4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHAC2Q9Y5I4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 AL355355.2-201ENST00000442321 338 ntBASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHAC2Q9Y5I4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 PTBP1P-201ENST00000554374 1601 ntBASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 AC133561.1-201ENST00000568600 2415 ntBASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 AL121603.2-201ENST00000557373 2117 ntBASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHAC2Q9Y5I4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHAC2Q9Y5I4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHAC2Q9Y5I4 AC079598.2-202ENST00000546624 1451 ntBASIC24.09■■□□□ 1.45
PCDHAC2Q9Y5I4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
PCDHAC2Q9Y5I4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHAC2Q9Y5I4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHAC2Q9Y5I4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHAC2Q9Y5I4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PCDHAC2Q9Y5I4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHAC2Q9Y5I4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms