Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFTPBP07988 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFTPBP07988 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SFTPBP07988 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SFTPBP07988 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SFTPBP07988 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.46■□□□□ 0.39
SFTPBP07988 AP001160.3-201ENST00000601484 763 ntBASIC17.46■□□□□ 0.39
SFTPBP07988 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SFTPBP07988 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.46■□□□□ 0.39
SFTPBP07988 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFTPBP07988 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SFTPBP07988 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SFTPBP07988 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFTPBP07988 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.46■□□□□ 0.38
SFTPBP07988 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SFTPBP07988 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SFTPBP07988 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.45■□□□□ 0.38
SFTPBP07988 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.45■□□□□ 0.38
SFTPBP07988 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.45■□□□□ 0.38
SFTPBP07988 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.45■□□□□ 0.38
SFTPBP07988 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
SFTPBP07988 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.45■□□□□ 0.38
SFTPBP07988 AC080038.1-201ENST00000611274 1154 ntBASIC17.45■□□□□ 0.38
SFTPBP07988 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.45■□□□□ 0.38
SFTPBP07988 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.45■□□□□ 0.38
SFTPBP07988 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SFTPBP07988 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 AL512408.1-201ENST00000569378 2000 ntBASIC17.45■□□□□ 0.38
SFTPBP07988 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTPBP07988 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SFTPBP07988 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
SFTPBP07988 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.44■□□□□ 0.38
SFTPBP07988 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.44■□□□□ 0.38
SFTPBP07988 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SFTPBP07988 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.44■□□□□ 0.38
SFTPBP07988 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SFTPBP07988 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
SFTPBP07988 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.44■□□□□ 0.38
SFTPBP07988 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 BID-214ENST00000617586 542 ntTSL 5 BASIC17.44■□□□□ 0.38
SFTPBP07988 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.44■□□□□ 0.38
SFTPBP07988 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SFTPBP07988 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SFTPBP07988 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFTPBP07988 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.43■□□□□ 0.38
SFTPBP07988 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SFTPBP07988 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.43■□□□□ 0.38
SFTPBP07988 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.43■□□□□ 0.38
SFTPBP07988 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.43■□□□□ 0.38
SFTPBP07988 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.43■□□□□ 0.38
SFTPBP07988 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SFTPBP07988 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SFTPBP07988 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SFTPBP07988 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.42■□□□□ 0.38
SFTPBP07988 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.42■□□□□ 0.38
SFTPBP07988 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms