RNA–Protein interactions for RNA: ENST00000320892.10

RNF144A-201, Transcript of ring finger protein 144A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF144A, Length 5,743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144A-201ENST00000320892 DCAF8L2P0C7V8 631 aa31.43■■■□□ 2.62
RNF144A-201ENST00000320892 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
RNF144A-201ENST00000320892 EHMT2Q96KQ7 1210 aa29.48■■■□□ 2.31
RNF144A-201ENST00000320892 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
RNF144A-201ENST00000320892 PELP1Q8IZL8 1130 aaKnown RBP28.75■■■□□ 2.19
RNF144A-201ENST00000320892 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
RNF144A-201ENST00000320892 TTBK1Q5TCY1 1321 aaPredicted RBP28.49■■■□□ 2.15
RNF144A-201ENST00000320892 APLP2Q06481 763 aa28.45■■■□□ 2.15
RNF144A-201ENST00000320892 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
RNF144A-201ENST00000320892 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
RNF144A-201ENST00000320892 RANGAP1P46060 587 aaPredicted RBP28.01■■■□□ 2.07
RNF144A-201ENST00000320892 ERICH6Q7L0X2 663 aa27.83■■■□□ 2.05
RNF144A-201ENST00000320892 CENPBP07199 599 aaPredicted RBP27.75■■■□□ 2.03
RNF144A-201ENST00000320892 CCER1Q8TC90 406 aaPredicted RBP27.72■■■□□ 2.03
RNF144A-201ENST00000320892 ATP1B4Q9UN42 357 aaPredicted RBP27.63■■■□□ 2.01
RNF144A-201ENST00000320892 TRIM41Q8WV44 630 aa27.52■■■□□ 2
RNF144A-201ENST00000320892 YTHDC1Q96MU7 727 aaKnown RBP27.51■■□□□ 1.99
RNF144A-201ENST00000320892 ZEB1P37275 1124 aaPredicted RBP27.47■■□□□ 1.99
RNF144A-201ENST00000320892 UBTFP17480 764 aaKnown RBP27.34■■□□□ 1.97
RNF144A-201ENST00000320892 PPARGC1BQ86YN6 1023 aaKnown RBP27.31■■□□□ 1.96
RNF144A-201ENST00000320892 NEFLP07196 543 aa27.22■■□□□ 1.95
RNF144A-201ENST00000320892 ITGAEP38570 1179 aa26.77■■□□□ 1.88
RNF144A-201ENST00000320892 POLR3GLQ9BT43 218 aa26.73■■□□□ 1.87
RNF144A-201ENST00000320892 MYT1Q01538 1121 aa26.72■■□□□ 1.87
RNF144A-201ENST00000320892 TRIM26Q12899 539 aaPredicted RBP26.71■■□□□ 1.87
RNF144A-201ENST00000320892 CNGB1Q14028 1251 aaPredicted RBP26.66■■□□□ 1.86
RNF144A-201ENST00000320892 HRCP23327 699 aa26.64■■□□□ 1.86
RNF144A-201ENST00000320892 LOC105371045A0A1W2PR82 267 aa26.55■■□□□ 1.84
RNF144A-201ENST00000320892 DAXXQ9UER7 740 aaPredicted RBP26.54■■□□□ 1.84
RNF144A-201ENST00000320892 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.83
RNF144A-201ENST00000320892 MYT1LQ9UL68 1186 aa26.49■■□□□ 1.83
RNF144A-201ENST00000320892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.48■■□□□ 1.83
RNF144A-201ENST00000320892 CHIC1Q5VXU3 224 aa26.27■■□□□ 1.8
RNF144A-201ENST00000320892 SLC4A1APQ9BWU0 796 aaKnown RBP26.14■■□□□ 1.78
RNF144A-201ENST00000320892 DIEXFQ68CQ4 756 aaKnown RBP26.05■■□□□ 1.76
RNF144A-201ENST00000320892 CLSPNQ9HAW4 1339 aa25.99■■□□□ 1.75
RNF144A-201ENST00000320892 ZNF316A6NFI3 1004 aaPredicted RBP25.94■■□□□ 1.74
RNF144A-201ENST00000320892 RTL5Q5HYW3 569 aaPredicted RBP25.94■■□□□ 1.74
RNF144A-201ENST00000320892 BCANQ96GW7 911 aa25.91■■□□□ 1.74
RNF144A-201ENST00000320892 FAM50AQ14320 339 aaKnown RBP25.87■■□□□ 1.73
RNF144A-201ENST00000320892 NEUROD1Q13562 356 aa25.82■■□□□ 1.72
RNF144A-201ENST00000320892 TRIM52Q96A61 297 aa25.77■■□□□ 1.72
RNF144A-201ENST00000320892 GTF3C3Q9Y5Q9 886 aa25.7■■□□□ 1.71
RNF144A-201ENST00000320892 ZNF326Q5BKZ1 582 aaKnown RBP25.63■■□□□ 1.69
RNF144A-201ENST00000320892 BCL11AQ9H165 835 aa25.53■■□□□ 1.68
RNF144A-201ENST00000320892 ANP32CO43423 234 aa25.48■■□□□ 1.67
RNF144A-201ENST00000320892 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
RNF144A-201ENST00000320892 PABPN1Q86U42 306 aaKnown RBP eCLIP25.37■■□□□ 1.65
RNF144A-201ENST00000320892 SLC24A1O60721 1099 aa25.3■■□□□ 1.64
RNF144A-201ENST00000320892 ZBTB47Q9UFB7 747 aaPredicted RBP25.3■■□□□ 1.64
RNF144A-201ENST00000320892 CANXP27824 592 aaKnown RBP25.26■■□□□ 1.63
RNF144A-201ENST00000320892 ARID3CA6NKF2 412 aa25.25■■□□□ 1.63
RNF144A-201ENST00000320892 FBLN2P98095 1184 aa25.22■■□□□ 1.63
RNF144A-201ENST00000320892 P3H3Q8IVL6 736 aa25.18■■□□□ 1.62
RNF144A-201ENST00000320892 NPM2Q86SE8 214 aaKnown RBP25.15■■□□□ 1.62
RNF144A-201ENST00000320892 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.61
RNF144A-201ENST00000320892 ANP32AP39687 249 aaKnown RBP25.02■■□□□ 1.6
RNF144A-201ENST00000320892 ABCC9O60706 1549 aa24.99■■□□□ 1.59
RNF144A-201ENST00000320892 ZNF777Q9ULD5 760 aaPredicted RBP24.98■■□□□ 1.59
RNF144A-201ENST00000320892 NEFMP07197 916 aa24.96■■□□□ 1.59
RNF144A-201ENST00000320892 FKBP8Q14318 412 aa24.94■■□□□ 1.58
RNF144A-201ENST00000320892 EIF5BO60841 1220 aaKnown RBP24.86■■□□□ 1.57
RNF144A-201ENST00000320892 SALL2Q9Y467 1007 aaPredicted RBP24.83■■□□□ 1.57
RNF144A-201ENST00000320892 CSRNP3Q8WYN3 585 aa24.81■■□□□ 1.56
RNF144A-201ENST00000320892 FAM9BQ8IZU0 186 aa24.79■■□□□ 1.56
RNF144A-201ENST00000320892 HNRNPUQ00839 825 aaKnown RBP eCLIP24.79■■□□□ 1.56
RNF144A-201ENST00000320892 DDX10Q13206 875 aaKnown RBP24.76■■□□□ 1.55
RNF144A-201ENST00000320892 HSP90AA1P07900 732 aaKnown RBP24.72■■□□□ 1.55
RNF144A-201ENST00000320892 CHGAP10645 457 aaKnown RBP24.7■■□□□ 1.54
RNF144A-201ENST00000320892 TONSLQ96HA7 1378 aa24.66■■□□□ 1.54
RNF144A-201ENST00000320892 NBR1Q14596 966 aa24.64■■□□□ 1.53
RNF144A-201ENST00000320892 PLPPR3Q6T4P5 718 aa24.64■■□□□ 1.53
RNF144A-201ENST00000320892 ARXQ96QS3 562 aa24.62■■□□□ 1.53
RNF144A-201ENST00000320892 ANP32BQ92688 251 aaKnown RBP24.61■■□□□ 1.53
RNF144A-201ENST00000320892 CHIC2Q9UKJ5 165 aa24.55■■□□□ 1.52
RNF144A-201ENST00000320892 UPF2Q9HAU5 1272 aaKnown RBP24.54■■□□□ 1.52
RNF144A-201ENST00000320892 IRX6P78412 446 aaPredicted RBP24.54■■□□□ 1.52
RNF144A-201ENST00000320892 CCDC136Q96JN2 1154 aa24.52■■□□□ 1.52
RNF144A-201ENST00000320892 STAG3Q9UJ98 1225 aa24.52■■□□□ 1.52
RNF144A-201ENST00000320892 HIRIP3Q9BW71 556 aaPredicted RBP24.48■■□□□ 1.51
RNF144A-201ENST00000320892 TMC1Q8TDI8 760 aa24.47■■□□□ 1.51
RNF144A-201ENST00000320892 ESF1Q9H501 851 aaKnown RBP24.47■■□□□ 1.51
RNF144A-201ENST00000320892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.46■■□□□ 1.51
RNF144A-201ENST00000320892 KDM2AQ9Y2K7 1162 aa24.41■■□□□ 1.5
RNF144A-201ENST00000320892 MRS2Q9HD23 443 aa24.4■■□□□ 1.5
RNF144A-201ENST00000320892 MIER1Q8N108 512 aa24.38■■□□□ 1.49
RNF144A-201ENST00000320892 SCAF1Q9H7N4 1312 aaKnown RBP24.34■■□□□ 1.49
RNF144A-201ENST00000320892 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.34■■□□□ 1.49
RNF144A-201ENST00000320892 SENP3Q9H4L4 574 aaPredicted RBP24.33■■□□□ 1.49
RNF144A-201ENST00000320892 WDR43Q15061 677 aaKnown RBP eCLIP24.33■■□□□ 1.49
RNF144A-201ENST00000320892 SENP3-EIF4A1A0A087X0R7 540 aa24.31■■□□□ 1.48
RNF144A-201ENST00000320892 PLEKHG5O94827 1062 aa24.19■■□□□ 1.46
RNF144A-201ENST00000320892 GLIPR1L2Q4G1C9 344 aa24.17■■□□□ 1.46
RNF144A-201ENST00000320892 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
RNF144A-201ENST00000320892 NPM1P06748 294 aaKnown RBP eCLIP24.13■■□□□ 1.45
RNF144A-201ENST00000320892 RRP7BPQ9NSQ0 103 aa24.11■■□□□ 1.45
RNF144A-201ENST00000320892 TSPY4P0CV99 314 aa24.1■■□□□ 1.45
RNF144A-201ENST00000320892 TSPY10P0CW01 314 aa24.1■■□□□ 1.45
RNF144A-201ENST00000320892 A0A0G2JS52 829 aa24.1■■□□□ 1.45
RNF144A-201ENST00000320892 ZBTB7CA1YPR0 619 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms