Protein–RNA interactions for Protein: Q06696

VPS36, Vacuolar protein-sorting-associated protein 36, yeastyeast

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS36Q06696 SDH2YLL041C 801 nt2.44□□□□□ -2.02
VPS36Q06696 COA4YLR218C 453 nt2.44□□□□□ -2.02
VPS36Q06696 YML007C-AYML007C-A 111 nt2.44□□□□□ -2.02
VPS36Q06696 ABF2YMR072W 552 nt2.44□□□□□ -2.02
VPS36Q06696 DAD3YBR233W-A 285 nt2.44□□□□□ -2.02
VPS36Q06696 BCK1YJL095W 4437 nt2.44□□□□□ -2.02
VPS36Q06696 ISW1YBR245C 3390 nt2.43□□□□□ -2.02
VPS36Q06696 DBP10YDL031W 2988 nt2.43□□□□□ -2.02
VPS36Q06696 YGL041CYGL041C 204 nt2.43□□□□□ -2.02
VPS36Q06696 RPS12YOR369C 432 nt2.43□□□□□ -2.02
VPS36Q06696 YNL018CYNL018C 1839 nt2.42□□□□□ -2.02
VPS36Q06696 CDC53YDL132W 2448 nt2.42□□□□□ -2.02
VPS36Q06696 SIR3YLR442C 2937 nt2.42□□□□□ -2.02
VPS36Q06696 YCK3YER123W 1575 nt2.42□□□□□ -2.02
VPS36Q06696 YNL198CYNL198C 303 nt2.42□□□□□ -2.02
VPS36Q06696 YOR333CYOR333C 417 nt2.42□□□□□ -2.02
VPS36Q06696 NUT2YPR168W 474 nt2.42□□□□□ -2.02
VPS36Q06696 COG8YML071C 1824 nt2.42□□□□□ -2.02
VPS36Q06696 SPO22YIL073C 2928 nt2.41□□□□□ -2.02
VPS36Q06696 BNI1YNL271C 5862 nt2.41□□□□□ -2.02
VPS36Q06696 APQ12YIL040W 417 nt2.41□□□□□ -2.02
VPS36Q06696 YLR146W-AYLR146W-A 189 nt2.41□□□□□ -2.02
VPS36Q06696 HCS1YKL017C 2052 nt2.41□□□□□ -2.02
VPS36Q06696 COS111YBR203W 2775 nt2.4□□□□□ -2.02
VPS36Q06696 VPS34YLR240W 2628 nt2.4□□□□□ -2.03
VPS36Q06696 GRR1YJR090C 3456 nt2.4□□□□□ -2.03
VPS36Q06696 RPO41YFL036W 4056 nt2.39□□□□□ -2.03
VPS36Q06696 SEC26YDR238C 2922 nt2.39□□□□□ -2.03
VPS36Q06696 TOF1YNL273W 3717 nt2.39□□□□□ -2.03
VPS36Q06696 RSE1YML049C 4086 nt2.39□□□□□ -2.03
VPS36Q06696 YDR426CYDR426C 378 nt2.39□□□□□ -2.03
VPS36Q06696 MBB1YJL199C 327 nt2.39□□□□□ -2.03
VPS36Q06696 YBR064WYBR064W 429 nt2.39□□□□□ -2.03
VPS36Q06696 YPR063CYPR063C 423 nt2.39□□□□□ -2.03
VPS36Q06696 ZRG8YER033C 3231 nt2.39□□□□□ -2.03
VPS36Q06696 SWA2YDR320C 2007 nt2.39□□□□□ -2.03
VPS36Q06696 TRS130YMR218C 3309 nt2.39□□□□□ -2.03
VPS36Q06696 YOL098CYOL098C 3114 nt2.38□□□□□ -2.03
VPS36Q06696 STB4YMR019W 2850 nt2.38□□□□□ -2.03
VPS36Q06696 UPS1YLR193C 528 nt2.38□□□□□ -2.03
VPS36Q06696 YOL155W-AYOL155W-A 135 nt2.38□□□□□ -2.03
VPS36Q06696 MGM1YOR211C 2646 nt2.38□□□□□ -2.03
VPS36Q06696 SKP2YNL311C 2292 nt2.38□□□□□ -2.03
VPS36Q06696 NEW1YPL226W 3591 nt2.37□□□□□ -2.03
VPS36Q06696 SWI6YLR182W 2412 nt2.37□□□□□ -2.03
VPS36Q06696 PAM16YJL104W 450 nt2.37□□□□□ -2.03
VPS36Q06696 YNL114CYNL114C 372 nt2.37□□□□□ -2.03
VPS36Q06696 YBL083CYBL083C 426 nt2.37□□□□□ -2.03
VPS36Q06696 YGR250CYGR250C 2346 nt2.37□□□□□ -2.03
VPS36Q06696 TUS1YLR425W 3924 nt2.37□□□□□ -2.03
VPS36Q06696 TOR1YJR066W 7413 nt2.37□□□□□ -2.03
VPS36Q06696 SLM1YIL105C 2061 nt2.37□□□□□ -2.03
VPS36Q06696 STH1YIL126W 4080 nt2.37□□□□□ -2.03
VPS36Q06696 CSF1YLR087C 8877 nt2.36□□□□□ -2.03
VPS36Q06696 SET2YJL168C 2202 nt2.36□□□□□ -2.03
VPS36Q06696 RPL42BYHR141C 321 nt2.36□□□□□ -2.03
VPS36Q06696 TRX1YLR043C 312 nt2.36□□□□□ -2.03
VPS36Q06696 RPS29AYLR388W 171 nt2.36□□□□□ -2.03
VPS36Q06696 RPL42AYNL162W 321 nt2.36□□□□□ -2.03
VPS36Q06696 YCL023CYCL023C 348 nt2.36□□□□□ -2.03
VPS36Q06696 BUB1YGR188C 3066 nt2.36□□□□□ -2.03
VPS36Q06696 TCB2YNL087W 3537 nt2.36□□□□□ -2.03
VPS36Q06696 IRR1YIL026C 3453 nt2.36□□□□□ -2.03
VPS36Q06696 CFT2YLR115W 2580 nt2.35□□□□□ -2.03
VPS36Q06696 YKL165C-AYKL165C-A 234 nt2.35□□□□□ -2.03
VPS36Q06696 YMR307C-AYMR307C-A 195 nt2.35□□□□□ -2.03
VPS36Q06696 YPR002C-AYPR002C-A 198 nt2.35□□□□□ -2.03
VPS36Q06696 snR43snR43 209 nt2.35□□□□□ -2.03
VPS36Q06696 VPS13YLL040C 9435 nt2.35□□□□□ -2.03
VPS36Q06696 MUK1YPL070W 1839 nt2.35□□□□□ -2.03
VPS36Q06696 NUP100YKL068W 2880 nt2.35□□□□□ -2.03
VPS36Q06696 NOP53YPL146C 1368 nt2.35□□□□□ -2.03
VPS36Q06696 VTC3YPL019C 2508 nt2.34□□□□□ -2.03
VPS36Q06696 PXA2YKL188C 2562 nt2.34□□□□□ -2.03
VPS36Q06696 FAR11YNL127W 2862 nt2.34□□□□□ -2.03
VPS36Q06696 MDM20YOL076W 2391 nt2.34□□□□□ -2.03
VPS36Q06696 YDR286CYDR286C 345 nt2.34□□□□□ -2.03
VPS36Q06696 tW(CCA)G1tW(CCA)G1 72 nt2.34□□□□□ -2.03
VPS36Q06696 tW(CCA)G2tW(CCA)G2 72 nt2.34□□□□□ -2.03
VPS36Q06696 tW(CCA)JtW(CCA)J 72 nt2.34□□□□□ -2.03
VPS36Q06696 tW(CCA)KtW(CCA)K 72 nt2.34□□□□□ -2.03
VPS36Q06696 tW(CCA)MtW(CCA)M 72 nt2.34□□□□□ -2.03
VPS36Q06696 tW(CCA)PtW(CCA)P 72 nt2.34□□□□□ -2.03
VPS36Q06696 YLR255CYLR255C 354 nt2.34□□□□□ -2.03
VPS36Q06696 IES4YOR189W 351 nt2.34□□□□□ -2.03
VPS36Q06696 ARP8YOR141C 2646 nt2.34□□□□□ -2.04
VPS36Q06696 NPR2YEL062W 1848 nt2.33□□□□□ -2.04
VPS36Q06696 IRA2YOL081W 9240 nt2.33□□□□□ -2.04
VPS36Q06696 snR60snR60 104 nt2.33□□□□□ -2.04
VPS36Q06696 YHR180W-AYHR180W-A 183 nt2.33□□□□□ -2.04
VPS36Q06696 YMR172C-AYMR172C-A 384 nt2.33□□□□□ -2.04
VPS36Q06696 YOR055WYOR055W 435 nt2.33□□□□□ -2.04
VPS36Q06696 RPH1YER169W 2391 nt2.33□□□□□ -2.04
VPS36Q06696 FKS3YMR306W 5358 nt2.33□□□□□ -2.04
VPS36Q06696 PDR1YGL013C 3207 nt2.33□□□□□ -2.04
VPS36Q06696 SVL3YPL032C 2478 nt2.32□□□□□ -2.04
VPS36Q06696 SCW11YGL028C 1629 nt2.32□□□□□ -2.04
VPS36Q06696 VMR1YHL035C 4779 nt2.32□□□□□ -2.04
VPS36Q06696 YHR032W-AYHR032W-A 180 nt2.32□□□□□ -2.04
VPS36Q06696 SLY1YDR189W 2001 nt2.32□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms